Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH4g0740 | ATGCCTTGCCCTTCTTCTCTATTCTCAGAAGTAAACTACTTCTGCTTCTGTTGCTTCACAGCCGTCATCATCGGCGGTGCTCTCTCGGCCTTAACTTTCCGATATGTAGCGAGGAAGTCACGCTGCAATCAGGAACCGACTACTGATGCTCCTCCTGGAAGCAGAGGACTGCCGCTGATCGGAGAAACCCTCCAGTTCATGGCTGCTATTAACAGTAGCAACGGTGTTTATGATTTCGTCCGAATCCGCTGCAATCGGTATGGAGGGTGTTTTAAGACGAGACTTTTCGGGGAAACCCATGTTTTTGTTTCGAGCACGGATTCAGCTAAGGTGATATTGAATGACGGAGGAAAATTCACGAAGAAGTATATGAGGTCGATTGCAGAGCTTGTTGGTGAACGGAGTTTGCTATGTGCTTCTAACGTGCATCACAAACTATTACGAAGCCGTCTGATCAATTTATTTTCCGCCACTTCTTTGGATTCGTTCGTCACCATGTTTGATGAACTGATCGTTGAGGCGCTTCGTCGTTGGGAGAGTGGAAGCACCATTATCATCCTTCATGAAGCACTTAAGATAACATGCAAAGCAATGTGCAAGATGCTGATAAGCTTAGAGAGAGAAAGAGAATTAGAGGTGATGCAAAAAGAGGTGGCCCATTTATGTGAAGCCATGCTTGCTTTCCCATTGAGATTTCCAGGGACTAGATTCCATAAAGGCCTCAAGGCAAGAAGAAGAATCATACACATCTTGGGAAAGACGATCAGAGAAAGGAGACTATCAGGTGCTGGCGGCCGCGATGACTTCTTGCAGCGGTTGTTGACGGAGGATGAGAAAGGCGGCAGCGGCCGAGGAGTGCTTGCGAATGCCGAGATTGAAGATAACATATTGACGATGATAATCGCCGGTCAGGATACGACGGCGAGTGCCATTACTTGGATGGTCAAGTTCTTGGATGAGAACCGTAATGTCCTTGACCTTCTTAGGACGGAACAGCTTCAAATATTGGCCAAATCAAAAGCTTCTCCAAGTTCTTACCTTACGCTGGAAGACCTAGGCGACATGTCGTATGGTACTAAGGTAGTAAAAGAATCCCTGAGGTTAGCATCTGTAGTGCCATGGTTCCCAAGGCTAGTCCTCCAAGACTCTGAAATTCAAGGCTATAAAATCAACAAAGGTTGGAATGTTAATATTGATGTTAGATCATTACATTCTGATCCCGCTCTTTACGATGATCCCACTATATTCAATCCTTCCAGATTTGACGATGAGGGGAAGCCATATAGCTTCCTAGCTTTTGGGATGGGAGGGAGGCAATGTCTTGGGATGAACATGGCGAAAGCCATGATGCTTGTCTTTCTTCACCGCTTGGTTACTTCTTACAGATGGAAAGTGATAAACTCCGACTCCAGCATTGAAAAGTGGGCCCTCTTTTCTAAACTCAAAAGTGGCTGTCCGGTCGTTGTTACACGTATTGAGCCCTAA | 1485 | 45.93 | MPCPSSLFSEVNYFCFCCFTAVIIGGALSALTFRYVARKSRCNQEPTTDAPPGSRGLPLIGETLQFMAAINSSNGVYDFVRIRCNRYGGCFKTRLFGETHVFVSSTDSAKVILNDGGKFTKKYMRSIAELVGERSLLCASNVHHKLLRSRLINLFSATSLDSFVTMFDELIVEALRRWESGSTIIILHEALKITCKAMCKMLISLERERELEVMQKEVAHLCEAMLAFPLRFPGTRFHKGLKARRRIIHILGKTIRERRLSGAGGRDDFLQRLLTEDEKGGSGRGVLANAEIEDNILTMIIAGQDTTASAITWMVKFLDENRNVLDLLRTEQLQILAKSKASPSSYLTLEDLGDMSYGTKVVKESLRLASVVPWFPRLVLQDSEIQGYKINKGWNVNIDVRSLHSDPALYDDPTIFNPSRFDDEGKPYSFLAFGMGGRQCLGMNMAKAMMLVFLHRLVTSYRWKVINSDSSIEKWALFSKLKSGCPVVVTRIEP | 494 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 4776752 | 4779494 | - | evm.model.ptg000015l.740 | HCH4g0740 | 542984 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH4g0740 | 494 | SUPERFAMILY | Cytochrome P450 | 49 | 491 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | CDD | CYP90-like | 83 | 491 | - | - | |
| HCH4g0740 | 494 | PRINTS | P450 superfamily signature | 431 | 440 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | P450 superfamily signature | 302 | 319 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | P450 superfamily signature | 360 | 371 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | P450 superfamily signature | 440 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | Gene3D | Cytochrome P450 | 40 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 433 | 442 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH4g0740 | 494 | PANTHER | CYTOCHROME P450 26 | 51 | 461 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) | |
| HCH4g0740 | 494 | PRINTS | E-class P450 group I signature | 399 | 423 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | E-class P450 group I signature | 359 | 377 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | E-class P450 group I signature | 430 | 440 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | E-class P450 group I signature | 291 | 308 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | E-class P450 group I signature | 440 | 463 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | PRINTS | E-class P450 group I signature | 84 | 103 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g0740 | 494 | Pfam | Cytochrome P450 | 51 | 469 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH12g1438 | HCH-Chr12:38685785 | HCH4g0740 | HCH-Chr4:4776752 | 1.20E-81 | dispersed | |
| HCH4g0740 | HCH-Chr4:4776752 | HCH6g0940 | HCH-Chr6:44195356 | 2.50E-58 | dispersed | |
| HCH14g0598 | HCH-Chr14:34772544 | HCH4g0740 | HCH-Chr4:4776752 | 6.70E-117 | wgd |
Pathway information