Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0860 ATGGCGGGAGGTGGCGGCGGCGGCGGACCGACGAGAGAGTTAGATCAGACGCCAACATGGGCCGTTTCCGCTGTTTGTGCAATCATCATTGTTATTTCCATTATATTGGAGAAAGTCCTTCACATGGTTGGAGCGATATTCCAGAGAAAGAAAAAGAAAGCATTATTCGAGGCGCTTGAGAAAGTAAAAGGCGAGCTTATGGTTTTAGGATTCATTTCTTTGCTCTTAACATTTGGGCAAAACTATATTGCTAGTATCTGCATTCCCACAAAGTATGGAAACACCATGTTGCCTTGCCCTTATAGAGGGTCTGGAAACTCACACAAAGAGCCTGAAGACAAAGGCGGCGAAGAAGACGACCATCACCGCAGACTTCTTTCGTACGATCACCATCGATTTCTCGCTGGCGCCGCCCCATCTGCAGGCTGCAAGCCAGGATATATACAACTTATATCTCCAAATGGTTTGCATCAATTACATATCTTCATCTTCTTTTTAGCCGTCCTCCATGTTATATTTAGCGGCATAACAATGACATTGGGAAGATTGAAAATTCGTGGGTGGAAAGACTGGGAAAGAGAAACTGTACAAGAACATGAGTTCATGAATGATCCTACGAGATTCAGACTTACTCATGAGACATCTTTTGTAAGAGATCATAGTAGTTTCTGGACTAAGACGCCTCTCTCTTTTTACTTTGTATCCTTCTTGAGACAATTTTTCAGGTCTGTTAGTAGAGCCGATTACTTGACACTTAGACATGGTTTTGTAACGGTTCATTTAGCACCTGGGAGTAAATTTAATTTCCAAAAGTACATCAAAAGGTCATTAGAAGATGACTTCAAAGTGGTAGTGGGAATCAGTCCTATATTATGGGCATCCATGGTGCTTTTTCTTCTTCTCAATGTCAGTGGGTGGCAGGTTATGCTTTGGGTGTCAATATTTCCTCTAGTCGTAATATTAGCCGTGGGAACAAAGCTTCAAGGAATAATAACATATATGGCGCTTGAAATAAAAGAGAGGCATGCTGTAGTCCAAGGGATACCCCTCGTCCAAGTCTCTGATAGAAACTTTTGGTTTAGTTGGCCTGTTTTAGTTCTCCATCTCATCCATTATGTTCTCTTCCAGAATGCATTTGAGATAACTTATTTCTTCTGGATATGGTATGAATTTGGCCTGAGATCATGCTTTCACGAAAACTTTGATCTTATTATCGTGAGGGTCGCACTTGGGGTTGGAGTTCAATTCTTGTGCAGCTACATTACACTCCCATTATATGCCCTTGTCACTCAGATGGGATCAACGATGAAGCAATCCATATTCGACGAACAAACTTCAAAAGCATTGAAAAATTGGCATAAAAACGCATTGAAGAAGAAGGGTGAAGGGAAATCTTCTCCTAGAACTTTAGGCGGCCTCGGCGGCGGTGGCGGTGGTGGAGGGAGCCCAAGTGATTCACCGACACAAACCCCACGGAATTCCCATCCTCGTTCAGTACCTCGAGGATCAGTTGACGTTGAAGCAAACGGGTCTTCAGCTCCTTCGGCTAATATAATGGCCACCGTTGATCTTACACAACAACGCCAACAACACTCTCATTTTGCGAATCGAGACTTGCTCAGCTGA 1626 43.23 MAGGGGGGGPTRELDQTPTWAVSAVCAIIIVISIILEKVLHMVGAIFQRKKKKALFEALEKVKGELMVLGFISLLLTFGQNYIASICIPTKYGNTMLPCPYRGSGNSHKEPEDKGGEEDDHHRRLLSYDHHRFLAGAAPSAGCKPGYIQLISPNGLHQLHIFIFFLAVLHVIFSGITMTLGRLKIRGWKDWERETVQEHEFMNDPTRFRLTHETSFVRDHSSFWTKTPLSFYFVSFLRQFFRSVSRADYLTLRHGFVTVHLAPGSKFNFQKYIKRSLEDDFKVVVGISPILWASMVLFLLLNVSGWQVMLWVSIFPLVVILAVGTKLQGIITYMALEIKERHAVVQGIPLVQVSDRNFWFSWPVLVLHLIHYVLFQNAFEITYFFWIWYEFGLRSCFHENFDLIIVRVALGVGVQFLCSYITLPLYALVTQMGSTMKQSIFDEQTSKALKNWHKNALKKKGEGKSSPRTLGGLGGGGGGGGSPSDSPTQTPRNSHPRSVPRGSVDVEANGSSAPSANIMATVDLTQQRQQHSHFANRDLLS 541
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 5508344 5513540 + evm.model.ptg000015l.860 HCH4g0860 543104
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0860 541 MobiDBLite consensus disorder prediction 508 541 - -
HCH4g0860 541 PANTHER MLO-LIKE PROTEIN 1 6 523 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH4g0860 541 MobiDBLite consensus disorder prediction 482 497 - -
HCH4g0860 541 Pfam Mlo family 12 491 IPR004326 GO:0006952(InterPro)|GO:0016020(InterPro)
HCH4g0860 541 MobiDBLite consensus disorder prediction 457 541 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH13g1293 HCH-Chr13:40917917 HCH4g0860 HCH-Chr4:5508344 4.00E-156 dispersed
HCH2g1166 HCH-Chr2:54237510 HCH4g0860 HCH-Chr4:5508344 1.30E-135 dispersed
HCH3g1261 HCH-Chr3:47585699 HCH4g0860 HCH-Chr4:5508344 1.60E-133 dispersed
HCH3g1263 HCH-Chr3:47782049 HCH4g0860 HCH-Chr4:5508344 2.10E-112 dispersed
HCH4g0860 HCH-Chr4:5508344 HCH6g1335 HCH-Chr6:47461147 9.50E-104 dispersed
HCH4g0860 HCH-Chr4:5508344 HCH14g0721 HCH-Chr14:35590540 4.20E-176 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0860 K08472 - csv:101208890 816.994