Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0958 ATGGCTGGTAGTAATGAAGTCAACCTCAATGAATCCAAGAGGGTTGTTCCACTCAATACTTGGGTACTTATCTCTAATTTCAAGTTAGCATATAACATCCTCCGCCGTGCCGATGGAACTTTCAACCGTGAGTTGGCGGAGTTCCTTGAACGGAAAGTTCCAGCCAATGTCATTCCAGTTGATGGGGTTTTCTCATTTGATCATGTTGATCGAGCCTCTGGCCTCCTCAATCGAGTTTACCAGCTGGCCCCTGAAAACGAAACTCAGTGGGGCTTTATCGATCTTGATAAGCCTTTGAGCACGTCGAAAGTTGTTCCTGTCATTTTATTTTTTCATGGTGGGAGCTTTGCTCATTCATCAGCCAATAGTGCTATCTATGACACCTTTTGCCGCCGCCTTGTGAACATCTGCAAGGCTGTTGTAGTTTCTGTTAACTACCGGAGGTCACCTGAACATCGCTATCCGTGTGCATATGAAGATGGCTGGGCAGCACTGAAATGGGTTAAATCAAAAACATGGCTTCAAAGTGGAAAGGATTCTAAGGTTCATGTGTACTTGGCTGGAGACAGTTCTGGTGGCAACATTGCTCATCATGTTGCAGTAAGGGCAGCTGAAGAAGAAGTTGAGGTATTGGGCAACATCCTTCTTCATCCGATGTTTGGGGGTGAAAAGAGAACGGAATCAGAGAAGAAACTCGACGGGAAGTACTTTGTAACCGTCCAAGACCGAGATTGGTATTGGAGAGCTTATCTTCCTGAAGGAGAAGACAGAGACCACCCTGCTTGTAACATCTTTGGTCCCAAAGGCCAAAGCATAGTACAACTCAAATTCCCAAAAAGTTTAGTTGTGGTCGCAGGTTTGGATCTTATCCAAGATTGGCAACTGGCTTATGTAGATGGGCTAAAAGATTCCGGTCACAACGTGAAGCTTCTATTCCTCGAGCAGGCTACTATCGGGTTCTACTTCTTGCCGAACAACGAACACTTCTACTGCCTAATGGAAGAGATAAACAACTTTGTGAACTGTTAA 1029 45.0 MAGSNEVNLNESKRVVPLNTWVLISNFKLAYNILRRADGTFNRELAEFLERKVPANVIPVDGVFSFDHVDRASGLLNRVYQLAPENETQWGFIDLDKPLSTSKVVPVILFFHGGSFAHSSANSAIYDTFCRRLVNICKAVVVSVNYRRSPEHRYPCAYEDGWAALKWVKSKTWLQSGKDSKVHVYLAGDSSGGNIAHHVAVRAAEEEVEVLGNILLHPMFGGEKRTESEKKLDGKYFVTVQDRDWYWRAYLPEGEDRDHPACNIFGPKGQSIVQLKFPKSLVVVAGLDLIQDWQLAYVDGLKDSGHNVKLLFLEQATIGFYFLPNNEHFYCLMEEINNFVNC 342
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6160856 6162403 - evm.model.ptg000015l.958 HCH4g0958 543202
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0958 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative serine active site. 184 196 IPR033140 -
HCH4g0958 342 Pfam alpha/beta hydrolase fold 108 321 IPR013094 GO:0016787(InterPro)
HCH4g0958 342 SUPERFAMILY alpha/beta-Hydrolases 88 340 IPR029058 -
HCH4g0958 342 ProSitePatterns Lipolytic enzymes "G-D-X-G" family, putative histidine active site. 108 124 IPR002168 GO:0016787(InterPro)
HCH4g0958 342 FunFam Gibberellin receptor GID1 1 342 - -
HCH4g0958 342 Gene3D alpha/beta hydrolase 1 341 IPR029058 -
HCH4g0958 342 PANTHER ARYLACETAMIDE DEACETYLASE 37 326 IPR050466 GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0009939(PANTHER)|GO:0010325(PANTHER)|GO:0010331(PANTHER)|GO:0048444(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0958 HCH-Chr4:6160856 HCH8g0147 HCH-Chr8:5800192 9.10E-153 dispersed
HCH4g0958 HCH-Chr4:6160856 HCH12g1616 HCH-Chr12:43009664 1.40E-57 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0958 K14493 - csv:101219912 657.521