Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g0999 ATGGGTGGAGAGGTAGAGATAGAAGCTGATGAAATCCCAAAAGATTCCATTAACAGCCTTCCACAACTCAAAGGAAAGAAGCTTTCTTGGCAAAAACTACGCAGATTGGATTCCATTGATATGGAATCAAGCAAGCTCGACCATCACCATGTCCAGGGCCGTGCCTCTAAGGTGACGGGGTGGTGGGTGATTATGAGACTGGCATTTCAAAGCATCGGAATAGTGTACGGAGACATCGGAACGTCGCCGTTGTACGTATTTCCGAGCACTTTTCCGGAGGGAATCAGACATAAGGATGATGTTTTGGGTGTTCTCTCTTTGATTTATTACACTTTAACCTTAATCCCTCTCCTTAAGTACGTCTTCATCGTCCTTCAAGCCAACGATAATGGTGATGGAGGAACGTTTGCATTGTACTCTCTGCTTTGCCGGTATGCAAAAATAGGGCTAATACCTAGCCAGGAAGCGGAGGATCGGGAGGTTTCGAATTACCGGCTAGAGACTCCAAACAACCGTATGCGGCGGGCGTCGAAGCTCAAGGCGGCGCTGGAAGGCAGCCCATTTGCCAAATTCTTCCTACTCTTCGCCACCATGCTTGGCACTTCTATGGTTATGGGAGACGGTGTTCTTACGCCTTGTATCTCAGTTTTATCGGCCGTTGGAGGTATTAAGAGAGCTGCAACTTCAATAACACAAGATACTATTGTTTGGATATCAGCAGCTATCTTGGTCTGCCTTTTCATGGTACAAAGATTTGGAACAGACAAGGTTGGATACAGTTTTGCTCCAATTATATGCATTTGGTTGTGTTTCATAGCTGGCATTGGATTCTTCAATTTTCTCAAGTTTGATTCCTCCGTTATCAAAGCTCTAAACCCTAAATATATCATTGATTATTTCAAAAGGAACAAAACTAGAGCTTGGATTTCCCTTGGTGGCACTGTTCTTTCCATTACAGGGACAGAAGCTTTATTTGCAGATCTCGGTCACTTCACAGTGAAGTCCATTCAAATCAGTACATGTGTTGTTATCTACCCTGCGTTATTACTTGCTTACACAGGACAAGCCTCTTTCCTTCGCAACCATCTTAATGACGTTGGAGACACTTTCTTCAAATCCATTCCAGGTCCTTTGTATTGGCCAATGTTTGTGTTGGCTGTGTTATCAGCAATAATAGCAAGCCAAGCCATGATTTCAGGAACATTCTCTGTAATTCAGCAATCTCTATCACTTGGGTGCTTCCCAAGAGTCAAAATTGTGCACACCTCGGCCAAGTATGAGGGTCAAGTTTACATTCCTGAAGTTAATTTCCTGCTCATGCTGGCTTGTTTGGCTGTCACGTTTGGTTTCAAAGAGACTGAGAAGATAGGCAATGCTTATGGTATTGCTGTTGTCTTTGTAATGACACTGACTTCATCATTCCTAGTTCTGATCATGATCATGATTTGGAAAACCCACATCATTCTCATCATCCTTTACATTCTCGTCATTGGTTCCATGGAGCTTCTCTATCTGTCTTCAGTTCTTTACAAATTCGACCAAGGCGGCTACCTCCCTCTAGCTTTTGCCTTTGCACTTACGGCCATGATGTACGTTTGGAACACTGTCTACAGAAAGAAGTACTTCTACGAACTTGAAAACAAGATCTCCTCACAGGAGTTCAACGAGATCGTTTCAAATGCAAACCCCTGTCGAGTTCCCGGCCTCGCAGTGTTCTACTCCGAGCTTGTTCAAGGGATTCCCCCCATTTTCAAGCATTACGTGGCCAATGTCCCCGCATTGCATAGCGTCCTCATATTCGTCTCCATCAAGTCGTTGCCGATAAGCAAGGTCCCGGCTGACGAACGGTTCCTCTTTCGGCGAGTCGAACCGAGAGAGCTCAATGTTTTTCGATGCGTGGTGCGATACGGTTACACCGATGGCCAGGGCGAGCAAGAGGAGCCGTTTGAGAAGGTGTTGGTGGAAAGGTTGAAGGGTTTTTTGAGAGATGATATTTGGTGTTGGAAGGGAGAGGAGAATGAGGAGTGTGCAAATGGAGGAATTGAGGAAGAGAAGAATGGAGTACGTAGAGAGGTCATATTGGAGAAAGATATTGAGGAAGTTGATAGTGCATGGAAAAACGGCGTCGTTCATTTGTTTGGAGAAAATGAGGTTGTAGCTAGGAAAGGATCAAGTTTTGGGAAGAGGGTTTTGATAAATTATGGTTACAATTTCTTGAAGAGAAATTTGAGACAGAGTGAAAAAGTCTTTGATATTCCTCACAAAAGAATGCTCAAAGTGGGAATGACATATGAGCTTTAG 2301 44.11 MGGEVEIEADEIPKDSINSLPQLKGKKLSWQKLRRLDSIDMESSKLDHHHVQGRASKVTGWWVIMRLAFQSIGIVYGDIGTSPLYVFPSTFPEGIRHKDDVLGVLSLIYYTLTLIPLLKYVFIVLQANDNGDGGTFALYSLLCRYAKIGLIPSQEAEDREVSNYRLETPNNRMRRASKLKAALEGSPFAKFFLLFATMLGTSMVMGDGVLTPCISVLSAVGGIKRAATSITQDTIVWISAAILVCLFMVQRFGTDKVGYSFAPIICIWLCFIAGIGFFNFLKFDSSVIKALNPKYIIDYFKRNKTRAWISLGGTVLSITGTEALFADLGHFTVKSIQISTCVVIYPALLLAYTGQASFLRNHLNDVGDTFFKSIPGPLYWPMFVLAVLSAIIASQAMISGTFSVIQQSLSLGCFPRVKIVHTSAKYEGQVYIPEVNFLLMLACLAVTFGFKETEKIGNAYGIAVVFVMTLTSSFLVLIMIMIWKTHIILIILYILVIGSMELLYLSSVLYKFDQGGYLPLAFAFALTAMMYVWNTVYRKKYFYELENKISSQEFNEIVSNANPCRVPGLAVFYSELVQGIPPIFKHYVANVPALHSVLIFVSIKSLPISKVPADERFLFRRVEPRELNVFRCVVRYGYTDGQGEQEEPFEKVLVERLKGFLRDDIWCWKGEENEECANGGIEEEKNGVRREVILEKDIEEVDSAWKNGVVHLFGENEVVARKGSSFGKRVLINYGYNFLKRNLRQSEKVFDIPHKRMLKVGMTYEL 766
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 6427655 6434347 - evm.model.ptg000015l.999 HCH4g0999 543243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g0999 766 PANTHER OSMOTIC STRESS POTASSIUM TRANSPORTER 45 765 IPR003855 GO:0006813(PANTHER)|GO:0015079(InterPro)|GO:0015079(PANTHER)|GO:0016020(InterPro)|GO:0016020(PANTHER)|GO:0071805(InterPro)
HCH4g0999 766 Pfam K+ potassium transporter C-terminal domain 567 766 IPR053952 -
HCH4g0999 766 NCBIfam potassium uptake protein 67 765 IPR003855 GO:0015079(InterPro)|GO:0016020(InterPro)|GO:0071805(InterPro)
HCH4g0999 766 Pfam K+ potassium transporter integral membrane domain 67 554 IPR053951 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0999 HCH-Chr4:6427655 HCH5g1145 HCH-Chr5:38196589 1.50E-243 dispersed
HCH4g0998 HCH-Chr4:6417672 HCH4g0999 HCH-Chr4:6427655 3.50E-306 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g0999 K03549 - csv:101204520 1134.01