Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH4g1139 | ATGAATATTGATACTTGCAATTTCACTTCTTCCTCTACCCTTCCGGCTGAGATTTCTGCTGGGAAATTTGTGATCCGGCAACTGTTTGATGCCCAAATCTTGGAGATTTTTGTGGCTGTTTTTGTTTTTCTAGCCATCCATGCCATCAGACAAAAGAGACACTACGGCATGTCGGTATGGCCAGTCATCGGGATGTTACCCGCTTTGGCGACGGCGGCACGGGGAAACCTCTATGAATGGATAACCGATATCCTCCACCTCCAAAAGGGAACATTTAAATTCCAAGGTCCTTGGTTCACTAGCCTCAATTGCGTCGTCACAGCCGACCCCCGAAACTTGGAACATCTTCTCAAGGCCAAGTTCCCCTTATACCCGAAAGGACCCTTCTTCCGCGACACGGTGAAAGACCTTCTCGGCAACGGCATATTCAATGCCGACGACGAAATATGGCAGCGACAAAGAAAAACCGCAAGTATCGAGTTTCACTCGGCAAAGTTCCGGCAACTAACAACCGATTCCTTATTCGAGCTCGTCCACACAAGACTCCAACCAGTACTCGAGCATTTCATCGAACAGTCGGTGCCCATGGACCTCCAGGACATCCTTTTACGTCTAACTTTCGACAACGTATGCATGATAGCCTTCGGCACCGATCCGGGTTGCTTACGCACCGCCTTACCGCAGATACCGTTCGCTAAGGCCTTCGAAGACGCCACGGAAGCCACCGTATTACGCTTCATAAAGCCGACTTTCGTATGGAAAACCATGAAGTACTTAAACCTTGGGACGGAGAAGAAGCTAAAGATATCTATAAAAGCCGTTGATGAATTCGCAGAGACTGTGATTCGTTCAAGAGAGAGAGAATTGATCACTGCAGATAAGAACCAAAGATCCGATTTATTAACGGTGTTTATGGGTCTGAGAGATGAGAAAGGGGACCCGTTTTCCGACAAGTTTCTCAGGGATATATGTGTAAATTTCATTCTTGCAGGGAGGGATACGTCTTCTGTGGCGTTAAGCTGGTTTTTTTGGTTGGTTGATCAAAACCCTAATGTGGAAGAGAGAATTCTGGCGGAGATTTATAAAATCGTTGGTCAAAGAGACGAGTTTAAAAATAGAGAGATTGAATTTGACTCTTTGGTGTTTAAAGCAGAAGAGATTAAGAAGATGGAGTATTTGCACGCTGCTTTATCTGAAACTCTCCGATTATATCCTTCCGTTCCCGCTGATCATAAAGAGGTTGCAGAGGACGACGAACTACCGGACGGAACGATTCTGAAGAAGGGAACAAAAATAATCTACGCCATATATGCAATGGGAAGGATGGAAGCTATATGGGGTAAAGATTGCCGGGAATTCAAACCAGAGAGATGGCTGAGGGATAGCCGCTTCATGAGCGAATCGGCCTACCGGTTCGCCGCCTTCAACGGCGGCCCTCGGCTATGTCTCGGCAAAGATTTTGCATACTACCAAATGAAATACGTCGCGGCGTCGATCATCCATCGCTTCCGTGTGACGGTGGTGGAAGGACATCCGGTGGAGCCAAAGCTTGCTTTGACTTTGTTCATGAAACACGGTCTTAAGGTCAATCTGATTAAGCGCGACGAGGGGCAGTTTCGGAAATATTTGGAAATTAATTAA | 1641 | 46.62 | MNIDTCNFTSSSTLPAEISAGKFVIRQLFDAQILEIFVAVFVFLAIHAIRQKRHYGMSVWPVIGMLPALATAARGNLYEWITDILHLQKGTFKFQGPWFTSLNCVVTADPRNLEHLLKAKFPLYPKGPFFRDTVKDLLGNGIFNADDEIWQRQRKTASIEFHSAKFRQLTTDSLFELVHTRLQPVLEHFIEQSVPMDLQDILLRLTFDNVCMIAFGTDPGCLRTALPQIPFAKAFEDATEATVLRFIKPTFVWKTMKYLNLGTEKKLKISIKAVDEFAETVIRSRERELITADKNQRSDLLTVFMGLRDEKGDPFSDKFLRDICVNFILAGRDTSSVALSWFFWLVDQNPNVEERILAEIYKIVGQRDEFKNREIEFDSLVFKAEEIKKMEYLHAALSETLRLYPSVPADHKEVAEDDELPDGTILKKGTKIIYAIYAMGRMEAIWGKDCREFKPERWLRDSRFMSESAYRFAAFNGGPRLCLGKDFAYYQMKYVAASIIHRFRVTVVEGHPVEPKLALTLFMKHGLKVNLIKRDEGQFRKYLEIN | 546 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 7470329 | 7472426 | - | evm.model.ptg000015l.1139 | HCH4g1139 | 543383 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH4g1139 | 546 | PRINTS | E-class P450 group I signature | 319 | 336 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | E-class P450 group I signature | 394 | 412 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | E-class P450 group I signature | 482 | 505 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | E-class P450 group I signature | 472 | 482 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | E-class P450 group I signature | 339 | 365 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 475 | 484 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH4g1139 | 546 | SUPERFAMILY | Cytochrome P450 | 57 | 534 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | P450 superfamily signature | 395 | 406 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | P450 superfamily signature | 330 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | P450 superfamily signature | 473 | 482 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PRINTS | P450 superfamily signature | 482 | 493 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | CDD | CYP86A | 92 | 527 | - | - | |
| HCH4g1139 | 546 | Gene3D | Cytochrome P450 | 40 | 539 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | FunFam | Cytochrome P450 | 48 | 537 | - | - | |
| HCH4g1139 | 546 | Pfam | Cytochrome P450 | 59 | 525 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH4g1139 | 546 | PANTHER | CYTOCHROME P450 | 45 | 527 | - | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0199 | HCH-Chr14:28344619 | HCH4g1139 | HCH-Chr4:7470329 | 3.50E-100 | dispersed | |
| HCH14g0201 | HCH-Chr14:28372122 | HCH4g1139 | HCH-Chr4:7470329 | 9.10E-101 | dispersed | |
| HCH3g1432 | HCH-Chr3:52232360 | HCH4g1139 | HCH-Chr4:7470329 | 1.70E-121 | dispersed | |
| HCH4g1139 | HCH-Chr4:7470329 | HCH5g0522 | HCH-Chr5:3564107 | 1.10E-123 | dispersed | |
| HCH4g1139 | HCH-Chr4:7470329 | HCH13g1126 | HCH-Chr13:37095798 | 2.20E-124 | transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH4g1139 | K15402 | - | csv:101212202 | 852.432 |