Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1149 ATGGCGGAATCTGAGCCTCGCGCCAAGCGCCCTAGGATTACGAGGGGGAAAGATGATTATATGCCTGGAAGTATAATTGAGATTGAGCTTCATAACTTTATGACCTTTAACCACTTGAAATGTAAACCAGGTTCACGTCTAAACCTTGTTATCGGGCCTAATGGATCCGGTAAAAGCTCTATTGTATGTGCTATTGCACTTGGTCTTGGTGGTGAGCCTCAGCTTCTTGGAAGGGCAACCAGTGTTGGAGCATATGTGAAGCGTGGAGAGGAGTCTGGTTATGTTAGAATAACATTAAGGGGTGATACTAAAGAGGAGAAGATTACAATTATGCGCAAAATGGACACACGTAACAGATCTGAGTGGTTGTTCAATGGAAAAGTTGTGCCAAAAAAAGACGTAGCTGGAATTATTCAAAGGTTCAACATTCAAGTTAATAATTTGACCCAATTCTTACCACAGGACAGGGTTTGTGAGTTTGCCAAATTAACTCCCGTACAACTTCTAGAAGAGACTGAAAAGGCCGTTGGTGATCCTCAACTTCCCGTCTTACATTACACACTTGTTGAGAAAAGTCGCGACATAAAAAATATAGAGCGAGCCATTGAGAAAAATGGAGACACCTTGGATCAGTTAAAGGCATTGAATGCTGAACAAGAGAAAGATGTTGAGCGTGTTCGTCAAAGAGATGAACTTTTAAAAAAGGTTGAGTCCATGAAAAAGAAATTGCCATGGCTAAAGTACGACATGAAAAAGGCTGAATATATGGAAGCTAAGGAAAAGGAAAGTAATGCCAAAAAAAAGTTAGATGAAGCAGCTAAAACTTTGAATGATCGGAAAGAACCAATTGAGAAACAAAGAAAGGAGAAAGCAACGTTTGATGCTAAAATAAAGAAGTATACCACGCTCATAAATGATAATCACAAGAAAAGGATGGATCTTCAGGAAACTGAAAACCGTTTGGTGGTACAAGTACAAGGAAAATTCAAAGAAATGGAAGAGTTAAAGAAACAAGAAGAATCTCGTCAACAGAGAATCTTGCGAGCCAAAGAGGAACTTGCAGCCGCTGAATTGGAACTTCAAAATTTGCCTCCTTATGAACATCCTAAGGATGAGATTGAGCGATTGCGTGCACAAATTTTGGATCTGGAAGTTTGTGCAAACCAAAAGAGACTTGCAAAGGCAGAAAACGAGAGAAATTTATCCCAAAAAAGAATTTCTTTGAGGCAGTGCTTGGATAGGTTAAAAGATATGGATAATACCAATACCAAAAAACTACATGCACTTCGAAATTCTGGAACTGAGAAGATATTTGAAGCTTATCACTGGCTACAAGAACATCGGCATGAGTTCAAAAAAGAGTTGTATGGTCCAGTGTTGTTGGAGGTCAATGTTTCTAATCGGACTCATGCTGACTACTTAGAAGGTCATATTCCATTCTATGTTTGGAAGGCCTTTATCACTCAACATTCTGATGATCGTGATGTTCTGGTCAAACACTTAAGCTCATTTGGTGTTCCTATAATAAATTATGAGGGAGGTGAAAGCCGCACAAGACAACATTTTGAAGATTCTGAAGAGATTCGTGCATTGGGCATATATTCAAGACTAGACCAAATTTTTGAAGCTCCTGCAGCTGTCAAGGAGGTCTTGACCATGCAATTTGGCTTGGATCATTCATATATTGGATCGAAAGAAACTGATCAGAAGGCAGATGAGGTCTCAAAATTGGGAATTTTAGATTTTTGGACTCCAGCAAATCATTACCGATGGTCTCGCTCTAGATACGGTGGTCACATGTCCGGAAGTGTAGAACCAGTAGATCGCTCAAATCTTCTTTTGTGTAATACGGATGCGGGAGAAATTGATGGGCTTCGGTCTAAGAAAAATGAACTTGAAGAATCTGTTTCTGCTTTAGAAGAAAATTTTAAGTCCTGTCAAATTGAGCTAAGACTGATGGAGGATGAAGAAGCTAAACTTCGCAAGCAACGGGATGATATTATAAATACTGTGCAACATGAGAAGAGAAAACGCCGTGAAATGGAACATCGCATTGATCAGAGGAAAAGGAAATTAGAATCTATGGAGCGGGAGGATGACCTGGATACTGTTGTGGCCAAGCTTGTTGACCAAGCTGCAAAATTTAACATCCAGCGGTTCCACTGTGCAATTGAAATTAAGCATTTACTTGTTGAGGCCCTTTCTCACAGACAGAGCTTAACTAAGAAGCATATGGCTTCTATTGAAGTTGATGCAAAGATTAGAGAATTGGAGGTGAATTTGAAGCAGCATGAAAAGTTTGCTTTGCAAGCATCAGTGGAATTTGAGTATTGTAAGAAAGAAGTTGAGGAATATCGACAACAACTTTTGGCTGCCAAGAAGCATGCTGAGTCTATTGCTGTGATCACCCCCGATCTTGAAAAGGAATTTCTTGAGATGGCAACTACAGTCGAGGAATTGGAGGCTGCTATTCAAGATAATATTTCTCAAGCTAATTCCATTCTGTTCTTGAACCACAATGTGCTTGAGGAATATGAACATCGTCAGCGTCAGATAAATTCCATGACACAAAAACTAGAAGCTGATAGGCATGAACTTGGAAAGTGTATGGCTGATATTGATAAGCTGAAGGGAAATTGGCTCCCAACTTTGAGGAAACTTGTTTCTCAGATAAATGAGACTTTTAGTCGCAACTTCCAAGAGATGGCTGTTGCTGGAGAAGTATTGTTAGATGAGCGTGATATGGAATTTGATCAATTTGGGATACTCATTAAAGTGAAGTTCAGACAATCAGGTCAGCTTCAGGTTCTTAGTGCTCATCATCAGTCTGGCGGGGAACGCTCGGTGTCTACAATTCTCTATCTTGTTTCCCTTCAAGACCTTACTAACTGTCCATTTAGGGTAGTTGATGAGATAAACCAAGGAATGGATCCTATAAATGAACGAAAAATGTTCCAGCAATTGGTGAGAGCTGCCAGCCAACCAAATACACCACAGTGTTTTCTACTTACTCCAAAGTTACTTCCAGAGTTGGAATATAGCGAGGCCTGTAGTATATTGAATATAATGAATGGGCCTTGGATAGAGCAACCCTCGAGAGTGTGGAGCAAGGGAGAAAGTTGGGGGTCGTTAATGAGCTATGTAGGAGAAAGCAGATGCTAA 3162 40.07 MAESEPRAKRPRITRGKDDYMPGSIIEIELHNFMTFNHLKCKPGSRLNLVIGPNGSGKSSIVCAIALGLGGEPQLLGRATSVGAYVKRGEESGYVRITLRGDTKEEKITIMRKMDTRNRSEWLFNGKVVPKKDVAGIIQRFNIQVNNLTQFLPQDRVCEFAKLTPVQLLEETEKAVGDPQLPVLHYTLVEKSRDIKNIERAIEKNGDTLDQLKALNAEQEKDVERVRQRDELLKKVESMKKKLPWLKYDMKKAEYMEAKEKESNAKKKLDEAAKTLNDRKEPIEKQRKEKATFDAKIKKYTTLINDNHKKRMDLQETENRLVVQVQGKFKEMEELKKQEESRQQRILRAKEELAAAELELQNLPPYEHPKDEIERLRAQILDLEVCANQKRLAKAENERNLSQKRISLRQCLDRLKDMDNTNTKKLHALRNSGTEKIFEAYHWLQEHRHEFKKELYGPVLLEVNVSNRTHADYLEGHIPFYVWKAFITQHSDDRDVLVKHLSSFGVPIINYEGGESRTRQHFEDSEEIRALGIYSRLDQIFEAPAAVKEVLTMQFGLDHSYIGSKETDQKADEVSKLGILDFWTPANHYRWSRSRYGGHMSGSVEPVDRSNLLLCNTDAGEIDGLRSKKNELEESVSALEENFKSCQIELRLMEDEEAKLRKQRDDIINTVQHEKRKRREMEHRIDQRKRKLESMEREDDLDTVVAKLVDQAAKFNIQRFHCAIEIKHLLVEALSHRQSLTKKHMASIEVDAKIRELEVNLKQHEKFALQASVEFEYCKKEVEEYRQQLLAAKKHAESIAVITPDLEKEFLEMATTVEELEAAIQDNISQANSILFLNHNVLEEYEHRQRQINSMTQKLEADRHELGKCMADIDKLKGNWLPTLRKLVSQINETFSRNFQEMAVAGEVLLDERDMEFDQFGILIKVKFRQSGQLQVLSAHHQSGGERSVSTILYLVSLQDLTNCPFRVVDEINQGMDPINERKMFQQLVRAASQPNTPQCFLLTPKLLPELEYSEACSILNIMNGPWIEQPSRVWSKGESWGSLMSYVGESRC 1053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 7611286 7659253 - evm.model.ptg000015l.1149 HCH4g1149 543393
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1149 1053 Gene3D - 847 1023 IPR027417 -
HCH4g1149 1053 Coils Coil 195 229 - -
HCH4g1149 1053 Coils Coil 248 279 - -
HCH4g1149 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 25 996 IPR027417 -
HCH4g1149 1053 Coils Coil 842 862 - -
HCH4g1149 1053 PANTHER STRUCTURAL MAINTENANCE OF CHROMOSOMES PROTEIN 5 1 1045 IPR027131 GO:0000724(PANTHER)|GO:0000724(InterPro)|GO:0003697(PANTHER)|GO:0005524(InterPro)|GO:0005634(PANTHER)|GO:0006281(InterPro)|GO:0016887(InterPro)|GO:0030915(PANTHER)|GO:0030915(InterPro)
HCH4g1149 1053 Pfam RecF/RecN/SMC N terminal domain 25 991 IPR003395 -
HCH4g1149 1053 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 751 1004 IPR027417 -
HCH4g1149 1053 Coils Coil 622 698 - -
HCH4g1149 1053 Gene3D - 24 218 IPR027417 -
HCH4g1149 1053 FunFam Structural maintenance of chromosomes 5 849 1020 - -
HCH4g1149 1053 Coils Coil 322 359 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1149 K22803 - csv:101210248 1818.9