Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH4g1324 | ATGTACGGAAGAAAAGCATTCCAGTTGGTGAAAGAGCAAGCAAGCGGCGAGAAAGGCCAGATTATGCATTTCAATAGCGACCTGTTTGATCAGGTTATTTCAGAATGTGAGCAGCATCATCTTGAGCTCCAATCCTTGATTAGGAAAATGCAGGAAGAAGGATTGGATCTACAGACAACTAAGAATGAAGATCATTTTGGTGCGCTCATTCATCACCTTGCTTTGGTTCGCAATAAACGATGCCTAATGGCTTATATGTATACTCGAGCTGAGATTATAAGAAGTTTGATATGGAAGGTCGGGTCTGTGCTTCCAACAGAAATACAAGAGAAGCTCAGCAACTCAGAGGAAGAGTATTTTAAGAAGCACTCTGCAGCTTTGAAAGCATCTATGTCGAGAGTGGAATTGGATTTGACTGTGGATATGGTACCACCTAAAGATCCATATATCCAAGTGAGAGTACTTGATGATATCGGTGAAGGAATCGTACTCAGTGATGATAAAACAGCAAATTTTGCCCGTCATTCCATACATTTTCTTAAACGAACTGATGCTGAACAATTCATCTCACGGGGGTTAATGGAGGAGCTCACAGGTTGA | 600 | 41.33 | MYGRKAFQLVKEQASGEKGQIMHFNSDLFDQVISECEQHHLELQSLIRKMQEEGLDLQTTKNEDHFGALIHHLALVRNKRCLMAYMYTRAEIIRSLIWKVGSVLPTEIQEKLSNSEEEYFKKHSAALKASMSRVELDLTVDMVPPKDPYIQVRVLDDIGEGIVLSDDKTANFARHSIHFLKRTDAEQFISRGLMEELTG | 199 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
4 | 9355638 | 9358031 | + | evm.model.ptg000015l.1324 | HCH4g1324 | 543568 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH4g1324 | 199 | Coils | Coil | 33 | 63 | - | - | |
HCH4g1324 | 199 | SUPERFAMILY | GINS helical bundle-like | 1 | 146 | IPR036224 | - | |
HCH4g1324 | 199 | PANTHER | PARTNER OF SLD5 | 1 | 198 | IPR005339 | GO:0000811(InterPro)|GO:0000811(PANTHER)|GO:0006260(InterPro)|GO:1902983(PANTHER) | |
HCH4g1324 | 199 | Pfam | GINS complex protein helical bundle domain | 61 | 133 | IPR021151 | - | |
HCH4g1324 | 199 | CDD | GINS_A_psf1 | 3 | 136 | IPR005339 | GO:0000811(InterPro)|GO:0006260(InterPro) | |
HCH4g1324 | 199 | CDD | GINS_B_Psf1 | 148 | 197 | - | - | |
HCH4g1324 | 199 | Gene3D | - | 1 | 134 | - | - |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH4g1324 | K10732 | - | csv:101205409 | 355.525 |