Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1422 ATGAACAGAACATCCTCTCCTTTTCACTTTCTTTTTGTTTCCATTGTCATCTTCTTAGTCTTTTCTACTGCCACTGCGGCGTTTGTATTTAAAGTCGGTGACGAGATGGGGTGGCGGGTTCCTCCGGCGAACAACTCGGCTTTTTACAATTACTGGGCTGCCATTAATAGATTTCAAGTCGGAGACTCTCTTTCTTTTGTGTACGTGAATGATTCTGTTCTGATGGTTGAGAAATGGGATTACTATCACTGCAATGCCAGTGAGCCCATCATGGCTTTCAACAATGGCAAGGGAATTATCAAGCTTGATAGGCCTGGCCCCTTCTACTTCATCAGTGGCTCTCCAGATCACTGCAAAAACGGCCAGCGTTTAGTCGTCGAAGTGATGTCGCTGCATCCGACTTTTCCGTCTCCCCCCGCCACTGCTGCTCCGCCCGAATATTATGCAGATGGCGCTCCTTCGCCTTCCCCCAATGCTGGAGCTGTTGTCACAGTAACTAGTTCATTGTTGATTGTTCTCATGGCTGCTTTTGGAATGTCACTATCCTCTCTGCAGTTTAATTGA 564 46.99 MNRTSSPFHFLFVSIVIFLVFSTATAAFVFKVGDEMGWRVPPANNSAFYNYWAAINRFQVGDSLSFVYVNDSVLMVEKWDYYHCNASEPIMAFNNGKGIIKLDRPGPFYFISGSPDHCKNGQRLVVEVMSLHPTFPSPPATAAPPEYYADGAPSPSPNAGAVVTVTSSLLIVLMAAFGMSLSSLQFN 187
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 10440631 10441522 - evm.model.ptg000015l.1422 HCH4g1422 543666
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1422 187 ProSiteProfiles Phytocyanin domain profile. 28 130 IPR003245 GO:0009055(InterPro)
HCH4g1422 187 PANTHER BLUE COPPER PROTEIN 21 139 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
HCH4g1422 187 SUPERFAMILY Cupredoxins 27 129 IPR008972 -
HCH4g1422 187 Pfam Plastocyanin-like domain 45 122 IPR003245 GO:0009055(InterPro)
HCH4g1422 187 CDD OsENODL1_like 28 129 IPR041846 -
HCH4g1422 187 Gene3D - 26 132 IPR008972 -
HCH4g1422 187 FunFam Early nodulin-like protein 1 27 133 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0475 HCH-Chr4:3107581 HCH4g1422 HCH-Chr4:10440631 4.20E-21 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1422 - - - 0.0