Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH4g1494 | ATGGCGGACCATTCCTCCAATCGCGAAATGGATTCACGATTCGATCACGACTCATCAAAACAACGTCTCTACAATCCTTACAAAGATCTCCAAGTTCCTTATCGAAACTTCCAAATCCCGACGTCTCCGGAATTCCTCTTCGACGAAGAAGCTCGCCGTCAACGCAGATCTTGGGGCGAGAATCTCACTTTCTACACAGGCTGTGGATATCTCGGAGGCGCGGTTGGCGGCGCCGCTACCGGCTTCGTGTCCGGTGTCAAGTCTTTCGAATCAGGCGATACTACGAAGCTTCGGATTAATAGGATCTTGAATTCTTCCGGTCATTCGGGTCGGGTTTGGGGAAACCGGATCGGTGTTATTGGATTGCTATATGCTGGTTTAGAGAGCGGGATCGAGGCTGTGAGGGATGCGGACGATGTGTGGAATTGTGTTGCGGCCGGGCTCGGTACCGGTGCGTTGTATCGTGCGGCGAGAGGCGTGCGATCGGCGGCTGTGGCGGGCGCTGTCGGCGGCGTTGTAGTTGGTGTGGCGGTGACGGCGAAGCAAGTGTTAAAGCGGTATGTGCCGATTTGA | 573 | 54.62 | MADHSSNREMDSRFDHDSSKQRLYNPYKDLQVPYRNFQIPTSPEFLFDEEARRQRRSWGENLTFYTGCGYLGGAVGGAATGFVSGVKSFESGDTTKLRINRILNSSGHSGRVWGNRIGVIGLLYAGLESGIEAVRDADDVWNCVAAGLGTGALYRAARGVRSAAVAGAVGGVVVGVAVTAKQVLKRYVPI | 190 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 4 | 11305217 | 11305789 | - | evm.model.ptg000015l.1494 | HCH4g1494 | 543738 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH4g1494 | 190 | Pfam | Tim17/Tim22/Tim23/Pmp24 family | 63 | 173 | - | - | |
| HCH4g1494 | 190 | PANTHER | TIM23 | 37 | 176 | IPR045238 | GO:0005744(PANTHER)|GO:0008320(PANTHER)|GO:0022857(InterPro)|GO:0030150(PANTHER)|GO:0031305(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH4g1494 | HCH-Chr4:11305217 | HCH8g0184 | HCH-Chr8:7013703 | 5.90E-53 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH4g1494 | K17794 | - | csv:101221925 | 298.516 |