Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1519 ATGGCGAATTCCCATCTTTCTTCCTCCATCATCTTCGTCTTCTTCTTCTTCTATTTCGTTCCCATAATTTTCTCTCTCTCATCCGACGATCCCCATACCTTTATCGTCCACGTGTCGAAATCGAAGAAACCCATACTTTTTGCCTCCCATCATCACTGGCACTCTTCCATTCTCGATTCTCTCTCTCCTTCCTCTCATCCAACCAAACTTCTTTACAACTACGAACGCGCCGTCAATGGCTTCTCCGCCCGTCTCACTGCCGATCAAGCGGCGGAGCTCCGTCATGTCCCCGGAATCATTTCCGTCATTCCTGAACAGATCCGTCAACTTCACACTACACGTACTCATCATTTCTTAGGTCTTGACGATAACCTTGGGTTATGGCCTAACTCCGATTACGCTGATGATATTATAGTCGGTGTTCTCGATACCGGGATTTGGCCGGAACATCCGAGTTTCTCTGATACTGGACTTTCTCCGGTTCCGGCGACCTGGAAAGGTATTTGTCAGGAAGCCGAAGATTTCCCGGCGACGGCGTGTAATCGGAAGATAATCGGCGCGAGAGCGTTTTTCTATGGCTACGCGTCGTATTTAGGTGAATCGCTTGTAGAATCAGCGGGATTCCGATCTCCTAGAGATACAGAAGGTCATGGAACTCACACAGCTTCAACCGCCGCCGGATCGATCGTACGGAACGCAAGTTTTTTTCAGTACGCCGCCGGAGAAGCCAGAGGCATGGCGAGCAAAGCTCGTATCGCTGTCTACAAGATCTGCTGGGCCTTTGGATGTTACGATTCCGATATTCTTGCTGCGATGGATCAAGCAATCGCGGACGGCGTCCACGTCATCTCTCTCTCCGTCGGATCCTCCGGTTTTCCTCCTGATTACTATCGTGATTCCATCGCCATCGGAGCTTTCGGCGCAACGCAGCACGGTATCGTCGTTTCTTGCTCCGCTGGAAACTCCGGTCCCGGACCGTACAGTGCTGTGAACATCGCTCCTTGGATCCTCACCGTCGGTGCTTCGACGATCGATAGAGAGTTTCCGGCTGATGTGATTTTAGGAGACGGTAGAGTTTTTAGCGGCGTTTCGCTCTATTCCGGCGATTCTCTTAACGGTTCGATGATTCCGCTAGTTTACGGCGGAGACTGTGGAAGTAGATTCTGCTACTCAGGAAGTCTTGATAGTTCCAAAGTTACCGGGAAAATCGTTATTTGCGACCGTGGAGGGAATGCTAGGGTTGCTAAAGGAGGCGCGGTGCAGCTAGCCGGCGGAATCGGTATAATTTTAGCTAATACCGATGAAAACGGCGAGGAGCTAATTGCAGATTCTCATTTAATTCCAGGAACAATGGTTGGAGAAATTGCTGGAAATAAGCTTAGAGATTACATTCATTCCGATCCGAAACCGAGTGCTACAATCGTGTTTCGCGGTACTGTAATTGGAACTTCTCCACCGGCCCCGAAGGTCGCTTCCTTCTCGAGCCGGGGTCCGAATTATCGGACCGCGGAGATTCTGAAACCGGATGTGATAGCTCCGGGAGTTAACATTTTAGCTGGTTGGACTGGCTTTACTAGTCCAACTGACCTAGACATTGATCCCAGAAGAGTTGATTTCAATATCATTTCTGGAACTTCAATGTCTTGCCCTCACGTTAGCGGTGTCGCGGCATTGCTTCGAAAGGCTTATCCGTCATGGTCGCCGGCTGCTATCAAATCTGCTTTGATTACCACTTCTTATACTCTTGATGATTCGGGGAAGCCAATTCAAGATCTCTCGAATGGCGAAGAATCAAACGCGTTTGTTCATGGTGCTGGTCATATCAATCCGAATAGAGCTCTGAATCCTGGATTGATTTATGATATCAGTGTTGAAGATTATGTGTCATTTCTCTGTTCCATTGGATATAGTTCTTACCAAATAGCTGTTTTTGTGAAGGGGCCTAAGCCTTGTGAGAACAAAGTGAGCAGCCCTGGAAATCTGAACTACCCATCCCTCTCTGTCGTCTTCAATTCTGACTCCGGCGGGGTGGTGAAATATACAAGAGTTGTTACGAATGTCGGAAACGAAACCGATGTAGTTTATCAGGTGAAAGTGGATGCTCCTCAAGGTGTGGAAATCAGTGTTCTTCCAAATGAGCTAGTGTTCAGTGCAGAGAAGAAAACGCAGTCTTATGAGGTTACATTCAAAGCTGTTGATTACGGGCAATCAGAGAGCTTTGGTTCGGTCGTGTGGTCGGATGGAACGCACGTCGTTAGGAGTCCGATCGCCGCCACGTTTCACAGTGGATTTTCAGCTTCTATTTAA 2307 48.46 MANSHLSSSIIFVFFFFYFVPIIFSLSSDDPHTFIVHVSKSKKPILFASHHHWHSSILDSLSPSSHPTKLLYNYERAVNGFSARLTADQAAELRHVPGIISVIPEQIRQLHTTRTHHFLGLDDNLGLWPNSDYADDIIVGVLDTGIWPEHPSFSDTGLSPVPATWKGICQEAEDFPATACNRKIIGARAFFYGYASYLGESLVESAGFRSPRDTEGHGTHTASTAAGSIVRNASFFQYAAGEARGMASKARIAVYKICWAFGCYDSDILAAMDQAIADGVHVISLSVGSSGFPPDYYRDSIAIGAFGATQHGIVVSCSAGNSGPGPYSAVNIAPWILTVGASTIDREFPADVILGDGRVFSGVSLYSGDSLNGSMIPLVYGGDCGSRFCYSGSLDSSKVTGKIVICDRGGNARVAKGGAVQLAGGIGIILANTDENGEELIADSHLIPGTMVGEIAGNKLRDYIHSDPKPSATIVFRGTVIGTSPPAPKVASFSSRGPNYRTAEILKPDVIAPGVNILAGWTGFTSPTDLDIDPRRVDFNIISGTSMSCPHVSGVAALLRKAYPSWSPAAIKSALITTSYTLDDSGKPIQDLSNGEESNAFVHGAGHINPNRALNPGLIYDISVEDYVSFLCSIGYSSYQIAVFVKGPKPCENKVSSPGNLNYPSLSVVFNSDSGGVVKYTRVVTNVGNETDVVYQVKVDAPQGVEISVLPNELVFSAEKKTQSYEVTFKAVDYGQSESFGSVVWSDGTHVVRSPIAATFHSGFSASI 768
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 11613993 11616299 - evm.model.ptg000015l.1519 HCH4g1519 543763
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1519 768 FunFam Subtilisin-like protease SBT1.5 136 358 - -
HCH4g1519 768 Gene3D - 345 481 - -
HCH4g1519 768 Pfam Peptidase inhibitor I9 33 111 IPR010259 -
HCH4g1519 768 Gene3D - 631 760 - -
HCH4g1519 768 SUPERFAMILY PA domain 396 467 IPR046450 -
HCH4g1519 768 ProSiteProfiles Serine proteases, subtilase domain profile. 109 614 - -
HCH4g1519 768 SUPERFAMILY Subtilisin-like 110 618 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH4g1519 768 CDD PA_subtilisin_like 351 474 - -
HCH4g1519 768 Pfam PA domain 377 460 IPR003137 -
HCH4g1519 768 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 756 IPR045051 -
HCH4g1519 768 PRINTS Subtilisin serine protease family (S8) signature 543 559 IPR015500 -
HCH4g1519 768 PRINTS Subtilisin serine protease family (S8) signature 134 153 IPR015500 -
HCH4g1519 768 PRINTS Subtilisin serine protease family (S8) signature 213 226 IPR015500 -
HCH4g1519 768 ProSitePatterns Serine proteases, subtilase family, serine active site. 544 554 IPR023828 -
HCH4g1519 768 Gene3D Peptidase S8/S53 domain 136 627 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH4g1519 768 FunFam subtilisin-like protease SBT1.5 345 481 - -
HCH4g1519 768 CDD Peptidases_S8_3 109 580 IPR034197 -
HCH4g1519 768 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 23 111 IPR037045 -
HCH4g1519 768 ProSitePatterns Serine proteases, subtilase family, aspartic acid active site. 139 150 IPR023827 -
HCH4g1519 768 FunFam Subtilisin-like protease SBT1.5 631 761 - -
HCH4g1519 768 Pfam Fibronectin type-III domain 660 757 IPR041469 -
HCH4g1519 768 FunFam Subtilisin-like protease SBT1.9 22 111 - -
HCH4g1519 768 Pfam Subtilase family 136 603 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g1519 HCH-Chr4:11613993 HCH4g1548 HCH-Chr4:12004080 1.80E-201 dispersed
HCH10g0224 HCH-Chr10:1879561 HCH4g1519 HCH-Chr4:11613993 1.40E-98 transposed
HCH4g1519 HCH-Chr4:11613993 HCH8g0597 HCH-Chr8:42753632 1.40E-214 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1519 - - - 0.0