Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1552 ATGTGGTGGAGATCAGCTTCTTTCATTCTGGACAAACAGCAAAACGAACCCTTTTCTAAACCCCCTGAAACCACCCTTTCAATTTCCCCTCCTTCCCTCAATTCCATGGCTGATACTTTTCAAAACCCTAACCCTAACCCTAATATCTCTGCTTATTACCAAAGTAGGGCTGCTCACACAGCCGTTGTTACTAGTGATTGGCTTGCTCAGGCTCAGGCCGCTGTTGGGTTTCAAACCGATGCCCAATTGTCGTCGGAAATTGAAATTAAGGATTCTGAATCCAATAAGCCGTTTTGTGTGATTGATGAATTTAATAATTGGAGGAAACAGCCGGATTTGGCTGAGGCCGTTGCGGCGATTCGGTCTTTGGCGGCTGTGATTCAGTCTAGTCAGGCTACTACCATGATGGAACTTGAAATTGAGCTCAAGAAGGCTTCGGACTCTCTGAAATCATGGGATACAACCTCTATATCATTAACAGCTGGCTGTGATTTATTCATGCGGTATGTAACTAGAACATCAGCTTTAGAATATGAGGACTTCAAGTCTGCTAAGTCTCGCTTGATTGAACGTGCAGAAAAATTTGGGGAGATATCTTGTAAGGCACGTAGAATCATTGCAATGCTTTGTCAGGACTTCGTTTTTGATGGTTGTACAATTTTGGTGCATGGTTTCTCTAGAGTTGTTATGGAAGTTCTGAAGCTGGCGGCACAGAATAAGAAGCTCTTTAGAGTGTTCTGCACAGAGGGAAGACCAGATAGGACAGGTTTACGCTTGTCCAATGAACTAGCTAAACTTGATGTCCCTGTAAAGCTCCTAATTGACTCAGCAGTAGCATATACTATGGATGAGGTTGATATGGTACTAGTCGGGGCTGATGGTGTAGTTGAAAGTGGTGGTATAATTAACATGATGGGCACATATCAAATTGCATTAGTGGCACATTGCATGAACAAACCGGTGTATGTGGCTGCTGAGAGTTACAAGTTTGCCCGTCTCTACCCATTGGATCAGAAAGACATGGCACCTGCTCTGCGTTCCATTGACTTTGGCGTTCCTATCCCATCCAAGGTTGAAGTTGAAAAATCTGCTCGAGATTATACTCCTCCTCAATACCTTACTCTTCTTTTTACAGATTTGGGTGTTCTCTCCCCATCTGTGGTGAGTGACGAGCTCATCCAACTATATTTATAG 1194 43.55 MWWRSASFILDKQQNEPFSKPPETTLSISPPSLNSMADTFQNPNPNPNISAYYQSRAAHTAVVTSDWLAQAQAAVGFQTDAQLSSEIEIKDSESNKPFCVIDEFNNWRKQPDLAEAVAAIRSLAAVIQSSQATTMMELEIELKKASDSLKSWDTTSISLTAGCDLFMRYVTRTSALEYEDFKSAKSRLIERAEKFGEISCKARRIIAMLCQDFVFDGCTILVHGFSRVVMEVLKLAAQNKKLFRVFCTEGRPDRTGLRLSNELAKLDVPVKLLIDSAVAYTMDEVDMVLVGADGVVESGGIINMMGTYQIALVAHCMNKPVYVAAESYKFARLYPLDQKDMAPALRSIDFGVPIPSKVEVEKSARDYTPPQYLTLLFTDLGVLSPSVVSDELIQLYL 397
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12034696 12037058 - evm.model.ptg000015l.1552 HCH4g1552 543796
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1552 397 SUPERFAMILY NagB/RpiA/CoA transferase-like 100 396 IPR037171 -
HCH4g1552 397 FunFam Translation initiation factor eIF-2B subunit alpha 201 397 - -
HCH4g1552 397 Gene3D - 200 397 IPR042529 -
HCH4g1552 397 Pfam Initiation factor 2 subunit family 110 385 IPR000649 GO:0044237(InterPro)
HCH4g1552 397 Coils Coil 135 155 - -
HCH4g1552 397 Gene3D - 98 198 IPR042528 -
HCH4g1552 397 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT ALPHA 95 397 IPR051501 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
HCH4g1552 397 FunFam Translation initiation factor eIF-2B subunit alpha 96 198 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1552 K03239 - csv:101211420 708.753