Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1569 ATGACTGAGGTAGAAGGTATTAGGAAACTTGTTGCAGCTAGGCAGTGCTTGAAAACTGGCCTGGAAAAATCAAGAGATGTTGCATCTGCACTTGCCAATGTAGGACCAAGATTCACTGACAAGGCCGGAAGACTTGCCCGTTTGGAGGATGAGCTTGTTCCGGTTCAAAACTGCAACTTTTCCGCCATTCGAGACCAAATAGACCATGCCATTGGATTTGCAGCCACACTAGTTAATGTTTTCAACACTGTTTTTGAACTTGAGAAGTCACTTGTCTTGGCTGATTCGTGTTCTGATCTCTCCGCTTACCTCTCAGTCATGAAACAGTTTGAAGAAGCACTCGAATTCCTTTCTGATAATTGCAGGCTCACGATTCAGTGGTCGGATGGTATTGTTCAATTCTTTGAAGATGAGGGAATACTCGTTGATCAGTATATTTTCAATGTTAAAGATTCATTGAGAATTCTTCACGAGTTGCGGGCAGCGGAGCGTAATGCTCGTGCGGATGGAGGGTCTCTCAGTTCTGCATTCAACAAGCTTGAATTTGAGTTCAGAAGGTTATTAACAGACTATAGTGCTTCTCTTCCTCTGGATGCTGCACTATTGTCCAGTGAAAACCAAGCCTTCATTGCATCCTCACAGTTACCAGAATCCGTAGTTCAAGAACTAAAATCAATTCTTACAAGAATGATAGCTAATGATCGAGTTGAAAACTGCATATCGATATTTGTCGAAGTTCGGAGTTCAAATGCCGTACTAAGTTTACAAGCTCTTGATTTGGATTATCTTGATATGTCAATAAGTGACTTGAGCAATTTGCAGAGTATTGAAGATCATATAAACAGATGGAGCAAGCATCTTGAGCTTGCTGTGAAGCATTTGTATGAGCCTGAAAATAAACTCTGCAATGACATATTTGAGAAGATTGAATTAGACGTCAGGACCGCATGTTTTGCCAAGATTGCATCACAATCTGGCTTTCTTTCTCTCCTCCAATTTGGGAGGAAGGTCACTCAAACCAAGAAGGACCCCATCAAGCTCTTAAACCTACTCGACATTTTCTCGGTTCTAGATAACCTAAGGAAGGACATCAACAAGCTTTTTGGTGGGAAAGCTTGCTCTGAGATTCAAGCCACGACAAGGGATCTCGTAAAAGGAGTCGTAAACGGCGTGTGCGAGGTTTTCTGGGAACTTCCAATTCAAGTAGAGTTGCAAAGAGGAACTTCTCCTCCTGCAGATGGTGGCATCCCAAGTATGGTAAGCTTTGTCACTGACTACTGCAACAAGCTGCTCGCAGACGATTACAAACCGATCTTAACCGAGGTTTTGATCATCCATCAAAGCTGGAAGCAAGAGACATATCAAGAGGATCTCCTGCCAAACCATATCTACCTCATTATAAAAGAAGTAGCTCTAAATTTAGATACATGGGCAAAATCCTACCAAGATATCTCACAATCCTACTACTTCATGATGAACAACCACTGCCATTTTAGCAACTTGAGAGGCACAAAACTAGGTGCCATGATGGGAGAAAGCTGGTTAAATGCACACAGCCAACACAAGGAATATTATGCAGCAATTTACCTGAGAGAATCCTGGGGGGAGCTTATCAGCCTTCAAAACCAAAAGGGTCATCTTCAAATTCCAAGTGGAAGAGACACAAACAATGATTTGTTAAAGAAGCAGCTGAAGGAATTCAATCAAACTTTTGAAAAAACTTATAAAAGGCAATCAAACTGGGTGATATCAGATAGATGCCTCAGAGAGAGAATTTGCCTGCTTTTAGTGCAGGCAATTGTGCCTTTTTACATGAAGAAATTTGAGGGTTTGGTTGAAAAGCAGCAAAATGCTGCTAAATATTTGAAGTATAGTGCAGAGAGCATGGAGAAAATGCTGAGCTCTCTGTTTCAGCCATTGTTGAGTAAATCCAGAAGCAGTGGTCATGGTCACAGGCATTCTCACTTCATGAGCAAAATTAACAAGGTTGTAACTAGTCAGTTTCGTGTGTCTGTCACTGCTCTGTGA 2028 41.62 MTEVEGIRKLVAARQCLKTGLEKSRDVASALANVGPRFTDKAGRLARLEDELVPVQNCNFSAIRDQIDHAIGFAATLVNVFNTVFELEKSLVLADSCSDLSAYLSVMKQFEEALEFLSDNCRLTIQWSDGIVQFFEDEGILVDQYIFNVKDSLRILHELRAAERNARADGGSLSSAFNKLEFEFRRLLTDYSASLPLDAALLSSENQAFIASSQLPESVVQELKSILTRMIANDRVENCISIFVEVRSSNAVLSLQALDLDYLDMSISDLSNLQSIEDHINRWSKHLELAVKHLYEPENKLCNDIFEKIELDVRTACFAKIASQSGFLSLLQFGRKVTQTKKDPIKLLNLLDIFSVLDNLRKDINKLFGGKACSEIQATTRDLVKGVVNGVCEVFWELPIQVELQRGTSPPADGGIPSMVSFVTDYCNKLLADDYKPILTEVLIIHQSWKQETYQEDLLPNHIYLIIKEVALNLDTWAKSYQDISQSYYFMMNNHCHFSNLRGTKLGAMMGESWLNAHSQHKEYYAAIYLRESWGELISLQNQKGHLQIPSGRDTNNDLLKKQLKEFNQTFEKTYKRQSNWVISDRCLRERICLLLVQAIVPFYMKKFEGLVEKQQNAAKYLKYSAESMEKMLSSLFQPLLSKSRSSGHGHRHSHFMSKINKVVTSQFRVSVTAL 675
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 12246572 12248599 - evm.model.ptg000015l.1569 HCH4g1569 543813
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1569 675 PANTHER EXOCYST COMPLEX PROTEIN EXO70 90 638 IPR004140 GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER)
HCH4g1569 675 Gene3D Exocyst complex component Exo70 133 643 - -
HCH4g1569 675 Pfam Exo70 exocyst complex subunit C-terminal 282 635 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
HCH4g1569 675 SUPERFAMILY Cullin repeat-like 77 637 IPR016159 -
HCH4g1569 675 Pfam Exocyst complex component Exo70 N-terminal 75 189 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0369 HCH-Chr4:2431886 HCH4g1569 HCH-Chr4:12246572 1.60E-188 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1569 K07195 - csv:101214965 926.391