Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1631 ATGGCGGGAACTGCCGATTCCGGTTCCTTTAGGGTTCCGTACAGGAACCTTCATGATGCAGAAGTGGAAATGGTGGCTTTGGATGAACAGCAGCTTCACGGGATCGATCTCAATTCTCCCCCTTCTTCTTCTTCTTCTTCTTCTGATAGATATCCCAATGGAAGATCCAATATTTCATCTTCAATACCTCCTGTTAGATCTACGCCCAATAGTTTGATTGCGTTAATTCTCAGTTGTACAATCGCTGCCGGTGTTCAATTTGGCTGGGCTTTACAACTTTCCCTGTTAACTCCCTATATTCAGACACTTGGAATAGAGCACGCGTTTTCTTCATTTATTTGGCTTTGTGGTCCCATCACAGGTCTCGTGGTTCAACCATGTGTTGGTATATGGAGTGATAAGTGTTCTTCAAAATATGGAAGGAGGCGTCCCTTTATTCTTGCTGGATCTGTAATGATAGCAGTTGCTGTGGTGTTGATTGGATATTCTGCTGATATTGGATATTTACTTGGAGACACGAAGGAACACTGCAGAACATTTAAAGGTACACGAACAAGAGCAGCCATTATCTTTGTAATTGGTTTTTGGATGCTTGATCTTGCCAACAATACGGTACAGGGACCTGCTCGTGCTCTTCTAGCTGATTTATCTGGTCCTGATCAACACAATGCCGCAAATGCTGTATTTTGTTCATGGATGGCTGTTGGTAATATCCTAGGTTTTTCAGCAGGAGCAAGTGGAAACTGGCACAAATGGTTTCCGTTTCTTTTGAGCAGTGCTTGCTGTGAAGCCTGTGGAAATCTTAAAGCAGCATTTCTTGTTGCCGTGCTTTTCCTAACCATATGTACTCTTGTGACCATCTATTTTGCCGATGAAGTTCCACTTACTGTAAACAAGCCATCACAATTATCAGATTCTGCTCCTCTGTTGAAGGGGCATGGGCAAAATAGTCCTGATATTTCAAAACCAAAACTGGACAATGCCAACGGGAGCATCGTTGACAATGGCTATGAAAAGAATATAAACTCAAATAATTCGAAATCAAATATGGAAAGTGAAAGTTATGATGATGGTCCTGCAGCTGTGGTAGTCAAATTGTTGACCAGTTTAAGACATTTACCACCAGCAATGCACTCAGTGCTTCTTGTTATGGCTCTTAGCTGGTTATCCTGGTTTCCCTTCTTCTTATTCGATACGGATTGGATGGGAAGGGAAGTATATCATGGGGATCCAAAAGGTAGCCTGACTGATCAACAGGTTTATGATCAAGGTGTCAGAGAAGGTGCATTTGGTTTGCTATTGAATTCGGTTGTTCTTGGCATCAGTTCTTTCTTTATAGAACCAATGTGTCAGCGTATGGGAGCGAGATTTGTTTGGGCAATGAGCAACTTTATTGTGTTTGCATGCATGGCAGGAACTACTGTTATCAGTTTAATATCTCTTAGTGAATATTCTAAAGGAATTGAACATGTTATTGGGGGAAATGCAACTATCAGAAATGCTGCCTTGGCCCTTTTTGCTTTTCTTGGTTTTCCTCTTGCTATAACATACAGTGTTCCCTTTTCTTTAACAGCAGAATTGACTGCTGATTCTGGTGGCGGGCAAGGATTGGCTATAGGAGTTCTGAATCTTGCCGTTGTTATTCCGCAGATGGTTGTATCACTTGGTGCTGGACCATGGGATGCTTTATTCAGTGGAGGAAACATTCCTGCATTTGCTTTGGCATCTATATGCGCCCTTGCAGCTGGAGTCGTTGCAATTCTCAGATTGCCTAATCTTTCCACCGCTTCTTTCAAGTCAACAGGTTTTCACGTTGGATAA 1821 42.23 MAGTADSGSFRVPYRNLHDAEVEMVALDEQQLHGIDLNSPPSSSSSSSDRYPNGRSNISSSIPPVRSTPNSLIALILSCTIAAGVQFGWALQLSLLTPYIQTLGIEHAFSSFIWLCGPITGLVVQPCVGIWSDKCSSKYGRRRPFILAGSVMIAVAVVLIGYSADIGYLLGDTKEHCRTFKGTRTRAAIIFVIGFWMLDLANNTVQGPARALLADLSGPDQHNAANAVFCSWMAVGNILGFSAGASGNWHKWFPFLLSSACCEACGNLKAAFLVAVLFLTICTLVTIYFADEVPLTVNKPSQLSDSAPLLKGHGQNSPDISKPKLDNANGSIVDNGYEKNINSNNSKSNMESESYDDGPAAVVVKLLTSLRHLPPAMHSVLLVMALSWLSWFPFFLFDTDWMGREVYHGDPKGSLTDQQVYDQGVREGAFGLLLNSVVLGISSFFIEPMCQRMGARFVWAMSNFIVFACMAGTTVISLISLSEYSKGIEHVIGGNATIRNAALALFAFLGFPLAITYSVPFSLTAELTADSGGGQGLAIGVLNLAVVIPQMVVSLGAGPWDALFSGGNIPAFALASICALAAGVVAILRLPNLSTASFKSTGFHVG 606
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 15285488 15296646 - evm.model.ptg000015l.1631 HCH4g1631 543875
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1631 606 FunFam Sucrose transport protein SUT5 378 598 - -
HCH4g1631 606 Gene3D MFS general substrate transporter like domains 68 589 IPR036259 -
HCH4g1631 606 MobiDBLite consensus disorder prediction 34 62 - -
HCH4g1631 606 CDD MFS_SLC45_SUC 75 588 - -
HCH4g1631 606 MobiDBLite consensus disorder prediction 35 62 - -
HCH4g1631 606 PANTHER SUGAR TRANSPORTER 70 587 - GO:0008506(PANTHER)|GO:0016020(PANTHER)
HCH4g1631 606 Pfam Major Facilitator Superfamily 82 538 IPR011701 GO:0022857(InterPro)|GO:0055085(InterPro)
HCH4g1631 606 FunFam Sucrose transporter SUC2 73 297 - -
HCH4g1631 606 SUPERFAMILY MFS general substrate transporter 74 592 IPR036259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0301 HCH-Chr4:1964281 HCH4g1631 HCH-Chr4:15285488 6.30E-126 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1631 K15378 - csv:101205348 1004.97