Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1854 ATGTTGTTTGTTTGTGGAAACAGACACGAAGTGGTCGGAGAAGTAGTAGAGGTCGGATCAGAAGTGAAGAGATTTCAAGTCGGAGCGTTGGTCGGAGTTGGATGTATCGTCGGATCATGTTCAAAATGCACTCCTTGTAATTCCGACAAGGAGCAATATTGTAACAAGAAAATATGGAGCTATAACGATGTTTATCACGACAGCAAGCCCACTCAAGGCGGCTTCTCCTCCGCCATGGTCGTCGATCAAAAGTTCGTCTTGAAAATCCCGGAAGGGATGTCACCAGAACAGGCAGCGCCGCTTCTCTGCGTCGGGGTGACGGTATATAGCCCTCTGAGCCACTTTGGGCTGAAAGAAAGTGGGTTAAGAGGGGGAATATTGGGTCTCGACGGCGTCGGACATATGGGAGTGAAGGTGGCAAAGGCATTAGGCCACCATGTGACGGTGATAAGCTCGTCGGAGAAAAAGAGAGAGGAAGCTTTGAAGCATCTCGGGGCTGATCGGTATTTGGTTAGCTCTGACGAGGCTTAG 531 49.72 MLFVCGNRHEVVGEVVEVGSEVKRFQVGALVGVGCIVGSCSKCTPCNSDKEQYCNKKIWSYNDVYHDSKPTQGGFSSAMVVDQKFVLKIPEGMSPEQAAPLLCVGVTVYSPLSHFGLKESGLRGGILGLDGVGHMGVKVAKALGHHVTVISSSEKKREEALKHLGADRYLVSSDEA 176
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48369516 48370119 + evm.model.ptg000015l.1854 HCH4g1854 544098
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1854 176 Pfam Alcohol dehydrogenase GroES-like domain 9 91 IPR013154 -
HCH4g1854 176 Gene3D - 8 103 - -
HCH4g1854 176 Gene3D - 104 175 - -
HCH4g1854 176 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 93 175 IPR036291 -
HCH4g1854 176 Pfam Zinc-binding dehydrogenase 131 172 IPR013149 -
HCH4g1854 176 SUPERFAMILY GroES-like 9 121 IPR011032 -
HCH4g1854 176 PANTHER ALDEHYDE REDUCTASE 8 175 IPR047109 GO:0009809(PANTHER)|GO:0016616(InterPro)|GO:0016616(PANTHER)|GO:0045551(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g1854 HCH-Chr4:48369516 HCH7g0690 HCH-Chr7:7911404 2.50E-74 dispersed
HCH4g1853 HCH-Chr4:48358294 HCH4g1854 HCH-Chr4:48369516 4.40E-89 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1854 K00083 - csv:101222395 303.138