Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH4g1859 ATGGCTTCCTTCTCAATTGGTGGGACCCACTTGCCCCTGTCTCATAATTTGAAGAGATTTTCTCTTCAGACCCAGTCTTCTATTTCACTCCCAATTCTCACTCCCTTTGGTTCTTCTTTGAGCAGAACCAGAGGTCTGAGGTTGCTTGGTAATAACCTTCTGGCCCGGGCCGAAGACGAAGCTAAAGGCTCTTCGCCGGCGTCCTCGGATTCTTCTTTTCAGCAAAAGCAAGCTCCAGCCAGTTTTAATAAGCAACTTGAGGAACTGACATTAAAATCAGGAACCTGTGATCCCCTATGTTCTGTTGATGAAACGAGTTCACGGGATTTTGAAGCTAATTACCAGCCAAAGAAGGATTTACTAAAGGCTCTTGCAATATTTGCAGCAGCCCTTATTGGAACTGTGGCTATTAACCACTCCTGGGTTGCTGCCAATCAGGATCTTGCTATGGTCTTGTTATTTGGCATAGGATATGCTGGAATCATTTTTGAAGAATCTCTAGCCTTCAACAAGAGTGGTGTGGGATTATTGATGGCGGTTAGCTTATGGGTTGTCCGAAGTATTGGGGCTCCATCAACTGAAATTGCTGTTTCAGAGCTATCACATGCAACAGCAGAAGTAAGTGAAATTGTATTTTTCTTACTCGGGGCAATGACCATAGTCGAGATTGTTGACGCTCATCAAGGATTTAAATTGGTTACTGACAGTATAACCACTCGAAAACCACGAACTCTCCTCTGGGTGATAGGATGCGTAACCTTTTTCCTGAGTTCAATCCTTGACAACCTGACGACCACAATTATCATGGTTTCTCTATTGCGGAAACTAATTCCTCCATCAGAGTATCGCAAGCTACTCGGAGCTGTTATCGTTATAGCAGCCAATGCTGGTGGTGCATGGACACCCATTGGTGATGTAACCACCACCATGTTGTGGATACATGGTCAGATATCAACTGTGCAAACACTCAAAGACTTGATTATCCCTTCAGCTATTTCACTTGTAGTCCCATTGGCTCTTCTGTCCCTAACTAGTGAAGTTAATGGAAAGAGACAGGATTTTTCTAATGTCATGGCATCTGAGCAGATGGCTCCTCGAGGAAAACTTGTCTTTTCTGTAGGCCTCGGAGCGTTGGTCTCTGTTCCAGTGTTCAAAGCTGTCACAGGTTTGCCCCCCTACATGGGTATGCTGCTTGGACTTGGGATCCTTTGGATTCTGACTGATGCTATTCATTATGGAGAATCGGAAGGGCAAAAGTTGAAAGTTCCTCAGGCCTTGTCTCGCATCGATACGCAAGGAGTGCTTTTTTTCCTTGGAATCCTTTTGTCTGTCAGCAGCTTAGAGGCTGCAGGGATTTTAAGGGAGTTAGCAAACTACCTTGATGCTCATATTCCAAATGCTGAACTCATTGCAAGTGCAGTTGGTGTTGTATCAGCAATTATAGACAATGTACCACTTGTTGCAGCAACTATGGGAATGTATGATCTCTCCTCCTTCCCTCAAGATTCTGAGTTCTGGCAGCTGATTGCATTTTGTGCTGGCACTGGTGGATCCATGCTCGTCATCGGATCTGCGGCCGGAGTTGCATTCATGGGGATGGAGAAAGTAGACTTCTTTTGGTACTTGAGAAAGGTTAGCGGTTTTGCATTTGCAGGTTATGCTGCTGGCATTGCTGCCTATTTAGCTCTTCATAACCTCAACATATCCCTACCTACAACCATTGCTGAGTTGCCTTTGATTTGGGGCTCATGA 1752 44.86 MASFSIGGTHLPLSHNLKRFSLQTQSSISLPILTPFGSSLSRTRGLRLLGNNLLARAEDEAKGSSPASSDSSFQQKQAPASFNKQLEELTLKSGTCDPLCSVDETSSRDFEANYQPKKDLLKALAIFAAALIGTVAINHSWVAANQDLAMVLLFGIGYAGIIFEESLAFNKSGVGLLMAVSLWVVRSIGAPSTEIAVSELSHATAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDSITTRKPRTLLWVIGCVTFFLSSILDNLTTTIIMVSLLRKLIPPSEYRKLLGAVIVIAANAGGAWTPIGDVTTTMLWIHGQISTVQTLKDLIIPSAISLVVPLALLSLTSEVNGKRQDFSNVMASEQMAPRGKLVFSVGLGALVSVPVFKAVTGLPPYMGMLLGLGILWILTDAIHYGESEGQKLKVPQALSRIDTQGVLFFLGILLSVSSLEAAGILRELANYLDAHIPNAELIASAVGVVSAIIDNVPLVAATMGMYDLSSFPQDSEFWQLIAFCAGTGGSMLVIGSAAGVAFMGMEKVDFFWYLRKVSGFAFAGYAAGIAAYLALHNLNISLPTTIAELPLIWGS 583
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
4 48574934 48580180 - evm.model.ptg000015l.1859 HCH4g1859 544103
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH4g1859 583 Pfam Citrate transporter 159 491 IPR004680 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH4g1859 583 NCBIfam sodium:proton antiporter NhaD 175 405 - -
HCH4g1859 583 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 54 580 IPR045016 GO:0006814(InterPro)|GO:0015297(InterPro)
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH4g1859 - - - 0.0