Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0059 | ATGGCCGGCAAAGCTCAAATCCCAACTAAAAGCTCGGCGCTTATTGCTATGATTGCAGACGAGGATACTGTGGTCGGATTTCTTCTTGCTGGAGTTGGTAATGTTGACCTGCGGAGAAAAACTAATTACCTTATTGTGGACTCAAAGACTACAGTTAAACAAATTGAAGATGCATTCAAGGAGTTCACTGCAAGGGAGGATATTGCAATCGTAATGATTAGCCAATATGTTGCAAACATGATCAGGTTTCTGGTAGATAGCTACAATAAGCCCATTCCTGCGATATTGGAGATTCCCTCCAAGGATCATCCCTATGACCCTGCCCACGATTCCATTCTTTCTCGAGTAAGGAACCTATTTTCTGCTGAATCAGTCGCATCCGGGAGGCGCTAA | 393 | 44.02 | MAGKAQIPTKSSALIAMIADEDTVVGFLLAGVGNVDLRRKTNYLIVDSKTTVKQIEDAFKEFTAREDIAIVMISQYVANMIRFLVDSYNKPIPAILEIPSKDHPYDPAHDSILSRVRNLFSAESVASGRR | 130 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 369586 | 370543 | + | evm.model.ptg000001l.59 | HCH5g0059 | 544211 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0059 | 130 | SUPERFAMILY | AtpF-like | 15 | 118 | IPR036906 | GO:0034220(InterPro) | |
HCH5g0059 | 130 | PANTHER | VACUOLAR ATP SYNTHASE SUBUNIT F | 1 | 126 | - | GO:0016020(PANTHER) | |
HCH5g0059 | 130 | FunFam | V-type proton ATPase subunit F | 9 | 122 | - | - | |
HCH5g0059 | 130 | Gene3D | ATPase, V1 complex, subunit F | 9 | 122 | IPR036906 | GO:0034220(InterPro) | |
HCH5g0059 | 130 | Pfam | ATP synthase (F/14-kDa) subunit | 15 | 116 | IPR008218 | GO:0034220(InterPro)|GO:0046961(InterPro) | |
HCH5g0059 | 130 | PIRSF | V-ATP_synth_F | 3 | 123 | IPR005772 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) | |
HCH5g0059 | 130 | NCBIfam | V-type ATPase subunit F | 12 | 124 | IPR005772 | GO:0033180(InterPro)|GO:0046961(InterPro)|GO:1902600(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH5g0059 | HCH-Chr5:369586 | HCH5g0791 | HCH-Chr5:6050725 | 6.50E-67 | dispersed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH5g0059 | K02151 | - | csv:101215239 | 243.432 |