Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0092 ATGGGACAAGAACAATTACAAGTACTAAGTGCACTTGATTCAGCCAAAACACAATGGTATCATTTCACAGCAATCATTATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTCTTCTGCATATCTCTTGTCACCAAATTGCTCGGACGCTTATACTATCATGTCGATGGCGCGTTGAAGCCCGGGACATTGCCTCCTAATGTCTCAGCTGCTGTTAATGGTGTGGCATTCATTGGAACTCTAACTGGGCAACTCTTCTTTGGATGGTTGGGTGACAAATTGGGCCGAAAGAAAGTTTATGGCATGACTCTTATGATTATGGTTATATGCTCAATAGCTTCTGGCCTTTCCTTTGGCCACACTGCAAAATCTGTCATGACTACTCTCTGCTTCTTCCGATTCTGGCTCGGTTTCGGCATTGGCGGCGATTACCCTCTTTCAGCAACCATCATGTCAGAATACTCAAATAAGAAGACTCGTGGTGCATTTATAGCTGCAGTATTTGCAATGCAGGGATTTGGAATTTTGGCTGGAGGTATATTTGCCATTTTTATTTCATCGGTATTCAAGGCCAAGTTTGATGCCCCAGCTTATGAAGTTGATCCAATTGGCTCTACTGTGCCGCAAGCAGATTATGTATGGAGGATCATTCTAATGTTTGGATCTATCCCAGCTGCTCTTACCTTCTATTCAAGGATGAAAATGCCGGAAACTGCACGCTACACCGCTCTTGTAGCGAAGAACTTAAACCAGGCGGCAGCAGATATGTCAAAAGTTTTGCAAGTGGATATTGAGGCAGAACCACAAAAGGTTGTGCAGCCATCTCAAGATAAAAAAGAATATGGTCTATTCTCTAAAGAGTTTCTTAGACGCCATGGAACTCACTTACTAGGAACTACAAGCTGTTGGTTTTTACTCGACATTGCATTCTATAGCCAAAACTTGTTTCAAAAAGATATCTTTAGTGCAATCGGATGGATTCCTCCACCAGCAACAATGAATGCACTTGAGGAAGTTTTCAGAATTGCAAGGGCTCAAACACTTATTGCCCTCTGCAGCACTGTCCCTGGCTACTGGTTCACAGTTGCTTTCATTGACAGGATAGGAAGATTTGCCATTCAATTGATGGGATTCTTCTTCATGACAGTTTTCATGTTTGCACTAGCCTTTCCTTACGAACATTGGACTCACAAGGACAACCGTATTGGCTTCGTCGTGTTGTACTCACTAACGTTCTTCTTTGCGAATTTCGGTCCTAATGCAACAACATTCGTCGTCCCGGCTGAAATATTTCCCTCAAGATTTCGATCCACTTGCCACGGTATATCATCGGCATCCGGGAAGCTCGGAGCCATGGTGGGTGCATTTGGATTCCTATATTTAGCACAAAACCAGGACCAGGCTAAAGCAGATGCAGGGTATCCTGCAGGCATTGGAGTGAAGAATTCACTTATAGTTTTGGGTGGTGTTAACTTGTTGGGAATGTTGTGTACTTTTCTAGTGCCTGAAGCCAAGGGAAAATCATTGGAAGAGATGTCTGGTGAGAATGAAGATGGAACTCTTGGAGACCAAACATCTAACACTAATTAA 1593 43.06 MGQEQLQVLSALDSAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRLYYHVDGALKPGTLPPNVSAAVNGVAFIGTLTGQLFFGWLGDKLGRKKVYGMTLMIMVICSIASGLSFGHTAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIFISSVFKAKFDAPAYEVDPIGSTVPQADYVWRIILMFGSIPAALTFYSRMKMPETARYTALVAKNLNQAAADMSKVLQVDIEAEPQKVVQPSQDKKEYGLFSKEFLRRHGTHLLGTTSCWFLLDIAFYSQNLFQKDIFSAIGWIPPPATMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALAFPYEHWTHKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPSRFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDQAKADAGYPAGIGVKNSLIVLGGVNLLGMLCTFLVPEAKGKSLEEMSGENEDGTLGDQTSNTN 530
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 576271 577863 - evm.model.ptg000001l.92 HCH5g0092 544244
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0092 530 CDD MFS_PhT 25 506 - -
HCH5g0092 530 NCBIfam phosphate:H+ symporter 11 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
HCH5g0092 530 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 507 IPR020846 GO:0022857(InterPro)
HCH5g0092 530 FunFam Inorganic phosphate transporter 1-6 20 528 - -
HCH5g0092 530 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 512 - -
HCH5g0092 530 MobiDBLite consensus disorder prediction 511 530 - -
HCH5g0092 530 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
HCH5g0092 530 Gene3D MFS general substrate transporter like domains 20 529 IPR036259 -
HCH5g0092 530 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH5g0092 HCH-Chr5:576271 HCH7g1330 HCH-Chr7:46208463 8.30E-238 dispersed
HCH5g0092 HCH-Chr5:576271 HCH5g0093 HCH-Chr5:579772 6.30E-302 tandem
HCH12g0032 HCH-Chr12:200307 HCH5g0092 HCH-Chr5:576271 3.20E-147 transposed
HCH13g0115 HCH-Chr13:725824 HCH5g0092 HCH-Chr5:576271 5.80E-231 transposed
HCH5g0092 HCH-Chr5:576271 HCH6g1501 HCH-Chr6:48563235 3.20E-237 wgd
HCH5g0092 HCH-Chr5:576271 HCH7g1329 HCH-Chr7:46194749 2.20E-238 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0092 K08176 - mtr:25499256 922.154