Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0093 ATGGGACAAGAACAATTACAAGTACTAAATGCACTTGATTCAGCCAAAACACAATGGTATCATTTCACAGCAATCATTATTGCTGGAATGGGATTCTTCACTGATGCATATGATCTCTTTTGCATATCTCTTGTCACCAAATTACTCGGACGTTTATACTATCATGTCGATGGCGCGTTGAAGCCTGGAACATTGCCTCCCAATGTCTCAGCTGCTGTTAATGGTGTGGCATTCATTGGAACGCTAACAGGGCAACTCTTCTTTGGCTGGTTGGGTGACAAATTGGGCCGAAAGCGAGTTTATGGCATGACTCTTATGATTATGGTTATATGCTCAATAGCTTCTGGCCTTTCCTTTGGCCACACTGCAAAATCTGTCATGACTACTCTCTGCTTCTTTCGATTCTGGCTCGGTTTCGGCATTGGCGGTGATTACCCTCTTTCAGCAACCATCATGTCAGAATACTCAAATAAGAAGACTCGTGGTGCATTCATTGCTGCAGTATTTGCAATGCAGGGATTTGGAATTTTGGCTGGAGGTATATTTGCCATTTTTATTTCATCGGTATTCAAGGCCAAGTTTGATGCCCCAGCTTATGAAGTTGATCCAATTGGCTCGACTGTGCCGCAAGCGGATTATGTGTGGAGGATTATTCTAATGTTTGGAGCTATCCCAGCTGCTCTTACCTTCTATTCGAGGATGAAAATGCCGGAAACTGCACGCTACACCGCTCTTGTAGCGAAGAACGCAAACCAGGCTGCAGCAGATATGTCAAAAGTTTTGCAAGTGGATATTGAGGCAGAACCACAAAAGGTTGTGCAGTCATCACAAGATAAAAAAGAATATGGTCTGTTCTCTAAAGAGTTTCTTAGACGCCATGGAACTCACTTACTAGGAACTACAAGCTGTTGGTTTTTACTCGACATTGCATTCTATAGCCAAAACTTGTTTCAAAAAGATATCTTTAGTGCAATTGGATGGATTCCTCCAGCAGCAACAATGAATGCACTTGAGGAAGTTTTCAGAATTGCAAGGGCTCAAACACTTATTGCCCTTTGCAGCACTGTCCCTGGCTACTGGTTCACAGTTGCTTTTATTGACAGGATAGGAAGATTTGCTATTCAGTTGATGGGATTCTTCTTCATGACTGTCTTCATGTTTGCTCTAGCCCTTCCTTATCAACATTGGACTCACAAGGACAACCGTATTGGCTTTGTCGTGTTGTACTCACTAACGTTCTTCTTTGCGAATTTCGGTCCTAATGCAACAACATTTGTCGTCCCCGCTGAAATATTTCCCTCAAGATTTCGATCTACTTGCCACGGTATATCATCGGCGTCGGGGAAGCTTGGAGCCATGGTGGGTGCATTTGGTTTTCTATATTTAGCACAAAACCAGGACCAGGCTAAAGCAGATGCAGGGTACCCTGCAGGTATTGGAGTGAAGAATTCACTTCTAGTTTTGGGTGGTGTTAACTTGTTAGGAATGTTGTGTACTTTTCTAGTGCCAGAAGCCAAGGGAAAATCGTTGGAGGAGATGTCAGGAGAGAATGAAGATGGAACCATTGGAGGGATGGGGGTTGGACAGACATCTAGCAGTAGAAAAGTCCCATATACTTAG 1620 43.33 MGQEQLQVLNALDSAKTQWYHFTAIIIAGMGFFTDAYDLFCISLVTKLLGRLYYHVDGALKPGTLPPNVSAAVNGVAFIGTLTGQLFFGWLGDKLGRKRVYGMTLMIMVICSIASGLSFGHTAKSVMTTLCFFRFWLGFGIGGDYPLSATIMSEYSNKKTRGAFIAAVFAMQGFGILAGGIFAIFISSVFKAKFDAPAYEVDPIGSTVPQADYVWRIILMFGAIPAALTFYSRMKMPETARYTALVAKNANQAAADMSKVLQVDIEAEPQKVVQSSQDKKEYGLFSKEFLRRHGTHLLGTTSCWFLLDIAFYSQNLFQKDIFSAIGWIPPAATMNALEEVFRIARAQTLIALCSTVPGYWFTVAFIDRIGRFAIQLMGFFFMTVFMFALALPYQHWTHKDNRIGFVVLYSLTFFFANFGPNATTFVVPAEIFPSRFRSTCHGISSASGKLGAMVGAFGFLYLAQNQDQAKADAGYPAGIGVKNSLLVLGGVNLLGMLCTFLVPEAKGKSLEEMSGENEDGTIGGMGVGQTSSSRKVPYT 539
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 579772 581391 + evm.model.ptg000001l.93 HCH5g0093 544245
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0093 539 CDD MFS_PhT 25 506 - -
HCH5g0093 539 MobiDBLite consensus disorder prediction 511 539 - -
HCH5g0093 539 FunFam Inorganic phosphate transporter 1-6 20 524 - -
HCH5g0093 539 MobiDBLite consensus disorder prediction 524 539 - -
HCH5g0093 539 Gene3D MFS general substrate transporter like domains 20 526 IPR036259 -
HCH5g0093 539 Pfam Sugar (and other) transporter 26 514 IPR005828 GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro)
HCH5g0093 539 PANTHER SOLUTE CARRIER FAMILY 22 MEMBER 9 512 - -
HCH5g0093 539 SUPERFAMILY MFS general substrate transporter 12 514 IPR036259 -
HCH5g0093 539 ProSiteProfiles Major facilitator superfamily (MFS) profile. 24 507 IPR020846 GO:0022857(InterPro)
HCH5g0093 539 NCBIfam phosphate:H+ symporter 11 516 IPR004738 GO:0005315(InterPro)|GO:0006817(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g0032 HCH-Chr12:200307 HCH5g0093 HCH-Chr5:579772 1.10E-147 dispersed
HCH13g0115 HCH-Chr13:725824 HCH5g0093 HCH-Chr5:579772 1.60E-233 dispersed
HCH5g0093 HCH-Chr5:579772 HCH7g1330 HCH-Chr7:46208463 5.30E-240 dispersed
HCH5g0092 HCH-Chr5:576271 HCH5g0093 HCH-Chr5:579772 6.30E-302 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0093 K08176 - mtr:25499256 910.598