Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0130 | ATGGATTCCAAAACCCAGATGGTTTTTCTTTTCCTTTCTTCCATTTCCCTCTGCTTTCTTTCAATCCAAGCAAACCCGTTTACTCTCCAAACTTACATTGTTCAACTCCACCCACAAGCTGAATCAAGCTCTCTGTTTGATTCTAAATTTCAATGGCATCTTTCGTTTCTTGAAAGAACTCTATCATCTGAAGAAGACTTTTCTTCTCGTTTGCTTTACTCTTATTCTAATGCTATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGCTCGAGTATTTGAAGAATTTGCCTGATGTAGTGGCAGTAAGATCAGACAGAAAGCATCAAATTCAGACAACTTATTCTTATAAGTTTTTGGGGTTGAGCTTAGAAGGACCGAGTGTTTGGTATAAGGCCGGATTCGGACAAGGATCGATAATCGGTGTGCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCTAGAATGCCTCCAATTCCAAGAAAATGGAGAGGGACTTGCCAAGAGGGGCAGGACTTCAATTCCTCATATTGTAATAGGAAACTCATTGGTGCCAAGTTCTTTATTAAAGGACATCATGTGGCTTCTAAGTCGTCGTCGTCTTCGGATATCTTTCAGGAATATGTCTCCCCTAGAGACTCTCATGGCCATGGGACTCACACATCTTCCACAGCTGGGGGAGCTTCAGTCCCAGCAGCGAGTGTGCTTGGCAATGGAGCTGGTGTGGCACGTGGGATGGCCCCAGGAGCTCGCATTGCAGTGTACAAAGTTTGCTGGTTCAGTGGCTGCTATAGCTCTGATATTGTAGCAGCTATTGATGCTGCAATAAGAGATGGTGTTGATATTCTCTCCCTTTCACTTGGTGGCTTCCCGATTCCGCTTTTTGATGACAGCATTGCCATTGGCAGTTTCCGAGCAATGCAGCATGGCATATCAGTCATCTGTGCAGCGGGAAACAATGGCCCAACTCAAAGTTCTGTTGCCAATGTAGCTCCTTGGATCTCCACCGTCGGCGCGAGCACATTAGACCGGAAATTCCCAGCTGTAGTTAGGCTGAGCAATGGAGAAGCCATATATGGTGAATCTATGTACCCTGGAAACAAGTTCATGGAATCTAGCAAAGAGCTTGAATTGGTTTATCTGAATGAAGGGGTAATGGGAGGTGAATTTTGCTTAAAAGGGTCTCTTCCACGAGAAAAAGTGCAAGGGAAAATGGTGATATGCGATCGTGGTGTCAATGGCAGAGCTGAAAAGGGGCAAGTTGTGAAGGACTCTGGAGGTGCTGCAATGATCCTGGCAAATACAGACATAAATATGGAGGAAGACTCGGTTGATGTTCATGTCCTGCCAGCGACATTGATCGGTTTCGCAGAAGCAACACGCTTAAAGACTTACATTAACTCCACAACCGATCCAAAAGCAAGAATCCAATTTGGAGGAACTGTGATAGGGAGATCAAGAGCTCCAATTGTAGCTCAGTTTTCAGCAAGAGGACCCAGCCTCTCTAACCCTTCAACTCTCAAGCCTGACATAATTGCTCCTGGAGTTAATATCATAGCAGCTTGGCCTCAAAACTTAGGTCCAACTGGCCTTCCAGAAGATTCTAGAAGAGTGAATTTCACTATCATGTCAGGAACTTCCATGGCCTGTCCCCATGTGAGTGGAATTGCAGCTCTCATCCATTCCGCTCACCCGAAATGGACACCGGCGGCGGTTAAATCGGCAATCATGACAACTGCAGATGTTACGGATCATTTTGGCAAACCAATTCTTGATGGCAACAAACCAGCAGGTGTTTTTGCAATGGGAGCTGGACATGTAAATCCAATAAGAGCAATGGATCCTGGCTTGGTTTATGATATCAAGCCACATGAATATGTCATTCATCTCTGCACTCTTGGATACACTCAAACAGAAATTTTCACCATCACTCACATGAATGTGAGCTGCCACAAACTTCTGCAAATGAATAGAGGCTTCAGCCTAAACTATCCCTCCATGTCTGTCATTTTCAAGCACGGAACGACAAGTAAGTCGATTTCTAGACGATTAACAAATGTCGGGAGCCCGAAATCCATTTACTCAGTAGAAGTAAAAGCACCAGAAGGGGTAAGAGTTAGAGTTAAACCTCAGCAACTAGTTTTCAAGCATGTGAATCAAAGTTTGAGTTATAAGGTATGGTTTATATCAAAGAAGAGAATTGAAGGAAGAAAAGTGAGCTTTGCTGAAGGATATTTGACATGGGTGCAGTCTAAAAATGACAAATACAGAGTTAGAAGCCCAATTGTGGTGAATTGGAAGTAG | 2316 | 43.96 | MDSKTQMVFLFLSSISLCFLSIQANPFTLQTYIVQLHPQAESSSLFDSKFQWHLSFLERTLSSEEDFSSRLLYSYSNAMEGFAAQLSETELEYLKNLPDVVAVRSDRKHQIQTTYSYKFLGLSLEGPSVWYKAGFGQGSIIGVLDTGVWPESPSFSDSRMPPIPRKWRGTCQEGQDFNSSYCNRKLIGAKFFIKGHHVASKSSSSSDIFQEYVSPRDSHGHGTHTSSTAGGASVPAASVLGNGAGVARGMAPGARIAVYKVCWFSGCYSSDIVAAIDAAIRDGVDILSLSLGGFPIPLFDDSIAIGSFRAMQHGISVICAAGNNGPTQSSVANVAPWISTVGASTLDRKFPAVVRLSNGEAIYGESMYPGNKFMESSKELELVYLNEGVMGGEFCLKGSLPREKVQGKMVICDRGVNGRAEKGQVVKDSGGAAMILANTDINMEEDSVDVHVLPATLIGFAEATRLKTYINSTTDPKARIQFGGTVIGRSRAPIVAQFSARGPSLSNPSTLKPDIIAPGVNIIAAWPQNLGPTGLPEDSRRVNFTIMSGTSMACPHVSGIAALIHSAHPKWTPAAVKSAIMTTADVTDHFGKPILDGNKPAGVFAMGAGHVNPIRAMDPGLVYDIKPHEYVIHLCTLGYTQTEIFTITHMNVSCHKLLQMNRGFSLNYPSMSVIFKHGTTSKSISRRLTNVGSPKSIYSVEVKAPEGVRVRVKPQQLVFKHVNQSLSYKVWFISKKRIEGRKVSFAEGYLTWVQSKNDKYRVRSPIVVNWK | 771 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 780864 | 783179 | - | evm.model.ptg000001l.130 | HCH5g0130 | 544282 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0130 | 771 | Gene3D | Peptidase S8 propeptide/proteinase inhibitor I9 | 21 | 112 | IPR037045 | - | |
HCH5g0130 | 771 | FunFam | Subtilisin-like protease SBT1.9 | 21 | 112 | - | - | |
HCH5g0130 | 771 | SUPERFAMILY | Subtilisin-like | 112 | 621 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH5g0130 | 771 | CDD | PA_subtilisin_like | 353 | 480 | - | - | |
HCH5g0130 | 771 | SUPERFAMILY | PA domain | 376 | 470 | IPR046450 | - | |
HCH5g0130 | 771 | ProSiteProfiles | Serine proteases, subtilase domain profile. | 114 | 617 | - | - | |
HCH5g0130 | 771 | Pfam | Fibronectin type-III domain | 666 | 768 | IPR041469 | - | |
HCH5g0130 | 771 | Gene3D | Peptidase S8/S53 domain | 139 | 630 | IPR036852 | GO:0004252(InterPro)|GO:0006508(InterPro) | |
HCH5g0130 | 771 | FunFam | subtilisin-like protease SBT1.5 | 347 | 487 | - | - | |
HCH5g0130 | 771 | CDD | Peptidases_S8_3 | 109 | 585 | IPR034197 | - | |
HCH5g0130 | 771 | PANTHER | PROPROTEIN CONVERTASE SUBTILISIN/KEXIN | 31 | 767 | IPR045051 | - | |
HCH5g0130 | 771 | Pfam | PA domain | 381 | 466 | IPR003137 | - | |
HCH5g0130 | 771 | FunFam | Subtilisin-like protease SBT1.5 | 138 | 361 | - | - | |
HCH5g0130 | 771 | SUPERFAMILY | Protease propeptides/inhibitors | 53 | 111 | - | - | |
HCH5g0130 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 136 | 155 | IPR015500 | - | |
HCH5g0130 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 548 | 564 | IPR015500 | - | |
HCH5g0130 | 771 | PRINTS | Subtilisin serine protease family (S8) signature | 217 | 230 | IPR015500 | - | |
HCH5g0130 | 771 | Pfam | Subtilase family | 136 | 587 | IPR000209 | GO:0006508(InterPro)|GO:0008236(InterPro) | |
HCH5g0130 | 771 | ProSitePatterns | Serine proteases, subtilase family, serine active site. | 549 | 559 | IPR023828 | - | |
HCH5g0130 | 771 | Gene3D | - | 634 | 770 | - | - | |
HCH5g0130 | 771 | Gene3D | - | 347 | 487 | - | - | |
HCH5g0130 | 771 | Pfam | Peptidase inhibitor I9 | 31 | 111 | IPR010259 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH4g0630 | HCH-Chr4:4128308 | HCH5g0130 | HCH-Chr5:780864 | 2.20E-118 | dispersed | |
HCH5g0130 | HCH-Chr5:780864 | HCH8g0597 | HCH-Chr8:42753632 | 5.40E-185 | dispersed | |
HCH5g0130 | HCH-Chr5:780864 | HCH11g1168 | HCH-Chr11:43856094 | 3.10E-185 | transposed |
Pathway information
