Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0130 ATGGATTCCAAAACCCAGATGGTTTTTCTTTTCCTTTCTTCCATTTCCCTCTGCTTTCTTTCAATCCAAGCAAACCCGTTTACTCTCCAAACTTACATTGTTCAACTCCACCCACAAGCTGAATCAAGCTCTCTGTTTGATTCTAAATTTCAATGGCATCTTTCGTTTCTTGAAAGAACTCTATCATCTGAAGAAGACTTTTCTTCTCGTTTGCTTTACTCTTATTCTAATGCTATGGAAGGATTTGCAGCTCAGTTATCTGAAACTGAGCTCGAGTATTTGAAGAATTTGCCTGATGTAGTGGCAGTAAGATCAGACAGAAAGCATCAAATTCAGACAACTTATTCTTATAAGTTTTTGGGGTTGAGCTTAGAAGGACCGAGTGTTTGGTATAAGGCCGGATTCGGACAAGGATCGATAATCGGTGTGCTTGACACTGGAGTTTGGCCTGAGAGTCCAAGCTTTAGTGATTCTAGAATGCCTCCAATTCCAAGAAAATGGAGAGGGACTTGCCAAGAGGGGCAGGACTTCAATTCCTCATATTGTAATAGGAAACTCATTGGTGCCAAGTTCTTTATTAAAGGACATCATGTGGCTTCTAAGTCGTCGTCGTCTTCGGATATCTTTCAGGAATATGTCTCCCCTAGAGACTCTCATGGCCATGGGACTCACACATCTTCCACAGCTGGGGGAGCTTCAGTCCCAGCAGCGAGTGTGCTTGGCAATGGAGCTGGTGTGGCACGTGGGATGGCCCCAGGAGCTCGCATTGCAGTGTACAAAGTTTGCTGGTTCAGTGGCTGCTATAGCTCTGATATTGTAGCAGCTATTGATGCTGCAATAAGAGATGGTGTTGATATTCTCTCCCTTTCACTTGGTGGCTTCCCGATTCCGCTTTTTGATGACAGCATTGCCATTGGCAGTTTCCGAGCAATGCAGCATGGCATATCAGTCATCTGTGCAGCGGGAAACAATGGCCCAACTCAAAGTTCTGTTGCCAATGTAGCTCCTTGGATCTCCACCGTCGGCGCGAGCACATTAGACCGGAAATTCCCAGCTGTAGTTAGGCTGAGCAATGGAGAAGCCATATATGGTGAATCTATGTACCCTGGAAACAAGTTCATGGAATCTAGCAAAGAGCTTGAATTGGTTTATCTGAATGAAGGGGTAATGGGAGGTGAATTTTGCTTAAAAGGGTCTCTTCCACGAGAAAAAGTGCAAGGGAAAATGGTGATATGCGATCGTGGTGTCAATGGCAGAGCTGAAAAGGGGCAAGTTGTGAAGGACTCTGGAGGTGCTGCAATGATCCTGGCAAATACAGACATAAATATGGAGGAAGACTCGGTTGATGTTCATGTCCTGCCAGCGACATTGATCGGTTTCGCAGAAGCAACACGCTTAAAGACTTACATTAACTCCACAACCGATCCAAAAGCAAGAATCCAATTTGGAGGAACTGTGATAGGGAGATCAAGAGCTCCAATTGTAGCTCAGTTTTCAGCAAGAGGACCCAGCCTCTCTAACCCTTCAACTCTCAAGCCTGACATAATTGCTCCTGGAGTTAATATCATAGCAGCTTGGCCTCAAAACTTAGGTCCAACTGGCCTTCCAGAAGATTCTAGAAGAGTGAATTTCACTATCATGTCAGGAACTTCCATGGCCTGTCCCCATGTGAGTGGAATTGCAGCTCTCATCCATTCCGCTCACCCGAAATGGACACCGGCGGCGGTTAAATCGGCAATCATGACAACTGCAGATGTTACGGATCATTTTGGCAAACCAATTCTTGATGGCAACAAACCAGCAGGTGTTTTTGCAATGGGAGCTGGACATGTAAATCCAATAAGAGCAATGGATCCTGGCTTGGTTTATGATATCAAGCCACATGAATATGTCATTCATCTCTGCACTCTTGGATACACTCAAACAGAAATTTTCACCATCACTCACATGAATGTGAGCTGCCACAAACTTCTGCAAATGAATAGAGGCTTCAGCCTAAACTATCCCTCCATGTCTGTCATTTTCAAGCACGGAACGACAAGTAAGTCGATTTCTAGACGATTAACAAATGTCGGGAGCCCGAAATCCATTTACTCAGTAGAAGTAAAAGCACCAGAAGGGGTAAGAGTTAGAGTTAAACCTCAGCAACTAGTTTTCAAGCATGTGAATCAAAGTTTGAGTTATAAGGTATGGTTTATATCAAAGAAGAGAATTGAAGGAAGAAAAGTGAGCTTTGCTGAAGGATATTTGACATGGGTGCAGTCTAAAAATGACAAATACAGAGTTAGAAGCCCAATTGTGGTGAATTGGAAGTAG 2316 43.96 MDSKTQMVFLFLSSISLCFLSIQANPFTLQTYIVQLHPQAESSSLFDSKFQWHLSFLERTLSSEEDFSSRLLYSYSNAMEGFAAQLSETELEYLKNLPDVVAVRSDRKHQIQTTYSYKFLGLSLEGPSVWYKAGFGQGSIIGVLDTGVWPESPSFSDSRMPPIPRKWRGTCQEGQDFNSSYCNRKLIGAKFFIKGHHVASKSSSSSDIFQEYVSPRDSHGHGTHTSSTAGGASVPAASVLGNGAGVARGMAPGARIAVYKVCWFSGCYSSDIVAAIDAAIRDGVDILSLSLGGFPIPLFDDSIAIGSFRAMQHGISVICAAGNNGPTQSSVANVAPWISTVGASTLDRKFPAVVRLSNGEAIYGESMYPGNKFMESSKELELVYLNEGVMGGEFCLKGSLPREKVQGKMVICDRGVNGRAEKGQVVKDSGGAAMILANTDINMEEDSVDVHVLPATLIGFAEATRLKTYINSTTDPKARIQFGGTVIGRSRAPIVAQFSARGPSLSNPSTLKPDIIAPGVNIIAAWPQNLGPTGLPEDSRRVNFTIMSGTSMACPHVSGIAALIHSAHPKWTPAAVKSAIMTTADVTDHFGKPILDGNKPAGVFAMGAGHVNPIRAMDPGLVYDIKPHEYVIHLCTLGYTQTEIFTITHMNVSCHKLLQMNRGFSLNYPSMSVIFKHGTTSKSISRRLTNVGSPKSIYSVEVKAPEGVRVRVKPQQLVFKHVNQSLSYKVWFISKKRIEGRKVSFAEGYLTWVQSKNDKYRVRSPIVVNWK 771
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 780864 783179 - evm.model.ptg000001l.130 HCH5g0130 544282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0130 771 Gene3D Peptidase S8 propeptide/proteinase inhibitor I9 21 112 IPR037045 -
HCH5g0130 771 FunFam Subtilisin-like protease SBT1.9 21 112 - -
HCH5g0130 771 SUPERFAMILY Subtilisin-like 112 621 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH5g0130 771 CDD PA_subtilisin_like 353 480 - -
HCH5g0130 771 SUPERFAMILY PA domain 376 470 IPR046450 -
HCH5g0130 771 ProSiteProfiles Serine proteases, subtilase domain profile. 114 617 - -
HCH5g0130 771 Pfam Fibronectin type-III domain 666 768 IPR041469 -
HCH5g0130 771 Gene3D Peptidase S8/S53 domain 139 630 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH5g0130 771 FunFam subtilisin-like protease SBT1.5 347 487 - -
HCH5g0130 771 CDD Peptidases_S8_3 109 585 IPR034197 -
HCH5g0130 771 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 31 767 IPR045051 -
HCH5g0130 771 Pfam PA domain 381 466 IPR003137 -
HCH5g0130 771 FunFam Subtilisin-like protease SBT1.5 138 361 - -
HCH5g0130 771 SUPERFAMILY Protease propeptides/inhibitors 53 111 - -
HCH5g0130 771 PRINTS Subtilisin serine protease family (S8) signature 136 155 IPR015500 -
HCH5g0130 771 PRINTS Subtilisin serine protease family (S8) signature 548 564 IPR015500 -
HCH5g0130 771 PRINTS Subtilisin serine protease family (S8) signature 217 230 IPR015500 -
HCH5g0130 771 Pfam Subtilase family 136 587 IPR000209 GO:0006508(InterPro)|GO:0008236(InterPro)
HCH5g0130 771 ProSitePatterns Serine proteases, subtilase family, serine active site. 549 559 IPR023828 -
HCH5g0130 771 Gene3D - 634 770 - -
HCH5g0130 771 Gene3D - 347 487 - -
HCH5g0130 771 Pfam Peptidase inhibitor I9 31 111 IPR010259 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g0630 HCH-Chr4:4128308 HCH5g0130 HCH-Chr5:780864 2.20E-118 dispersed
HCH5g0130 HCH-Chr5:780864 HCH8g0597 HCH-Chr8:42753632 5.40E-185 dispersed
HCH5g0130 HCH-Chr5:780864 HCH11g1168 HCH-Chr11:43856094 3.10E-185 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0130 - - - 0.0