Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0187 | ATGAGTGGAGAGAACAAGGTTTTCACTCTGGCTGAGGTTGCCTCCCACGACACTCGCAATGACTGCTGGTTGATCATTGAGAATAAGGTTTATGATGTAACAAAATTCCTAGAAGACCATCCCGGTGGCGATGAAGTCTTGTTGTCTGCCATAGGTAAGGATGCAACTAATGATTTCGACGACGTTGGACACAGTAGCGCTGCAAGAGCTATGATGGACGAATTCTATGTAGGGGATATTGATAGCTCGACGATTCCTGCAAAACGGAAGTACACTCCTCCCAAGCAGCCACTGTATAACCAAGACAAGACACGGGAATTCGTTATCAAGGTCCTCCAGTTTCTAGTTCCCCTGGTAATTTTGTGTTCGGCTTTCAGCATCCACCTCTTTACCAAGACATCATAA | 405 | 45.68 | MSGENKVFTLAEVASHDTRNDCWLIIENKVYDVTKFLEDHPGGDEVLLSAIGKDATNDFDDVGHSSAARAMMDEFYVGDIDSSTIPAKRKYTPPKQPLYNQDKTREFVIKVLQFLVPLVILCSAFSIHLFTKTS | 134 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 1065721 | 1066966 | - | evm.model.ptg000001l.187 | HCH5g0187 | 544339 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0187 | 134 | ProSiteProfiles | Cytochrome b5 family, heme-binding domain profile. | 5 | 81 | IPR001199 | - | |
HCH5g0187 | 134 | Pfam | Cytochrome b5-like Heme/Steroid binding domain | 9 | 80 | IPR001199 | - | |
HCH5g0187 | 134 | SUPERFAMILY | Cytochrome b5-like heme/steroid binding domain | 3 | 91 | IPR036400 | - | |
HCH5g0187 | 134 | PRINTS | Cytochrome B5 signature | 55 | 62 | IPR001199 | - | |
HCH5g0187 | 134 | PRINTS | Cytochrome B5 signature | 30 | 40 | IPR001199 | - | |
HCH5g0187 | 134 | PRINTS | Cytochrome B5 signature | 68 | 80 | IPR001199 | - | |
HCH5g0187 | 134 | PRINTS | Cytochrome B5 signature | 40 | 54 | IPR001199 | - | |
HCH5g0187 | 134 | SMART | Cyt_b5_2 | 8 | 81 | IPR001199 | - | |
HCH5g0187 | 134 | FunFam | Cytochrome b5 type B | 2 | 85 | - | - | |
HCH5g0187 | 134 | ProSitePatterns | Cytochrome b5 family, heme-binding domain signature. | 36 | 43 | IPR018506 | GO:0020037(InterPro) | |
HCH5g0187 | 134 | PANTHER | CYTOCHROME B5 | 4 | 118 | IPR050668 | GO:0005783(PANTHER)|GO:0016020(PANTHER)|GO:0020037(PANTHER)|GO:0043231(PANTHER) | |
HCH5g0187 | 134 | Gene3D | - | 2 | 84 | IPR036400 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH5g0187 | HCH-Chr5:1065721 | HCH5g0902 | HCH-Chr5:7492597 | 6.70E-43 | dispersed | |
HCH10g0497 | HCH-Chr10:4048577 | HCH5g0187 | HCH-Chr5:1065721 | 6.50E-18 | transposed | |
HCH13g1102 | HCH-Chr13:36055262 | HCH5g0187 | HCH-Chr5:1065721 | 6.60E-10 | transposed | |
HCH5g0187 | HCH-Chr5:1065721 | HCH7g1423 | HCH-Chr7:46974718 | 2.50E-50 | wgd |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH5g0187 | K23490 | - | csv:101212882 | 231.491 |