Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0214 ATGCTTCCCTTCTTCTTCTTCTTCTTCCTCCTCCCTCTCTTCATTTTCTTTTCTTCCTGCAATTCCATTAACATTCCATCAACAACTACCCATAACCGTAGATTACTCCATCAACCCTTTTTCCCACTTGATTCTTTCCCTCCATCGGAGCCACCCTCTCCCCCGCCTCCTACCCCGCCCAATCCCAAATACCCATTTTCCACTTCTCCTCCTACTACTCCTGATGGATCTCCATTCTTTCCTACGTTCCCGACGACCCCACCTCCTCCAGCACCGGCGAGCTTCGCTTCTTTCCCGGCGAACATTTCTTCCCTTATTCTCCCTCATTCCCCTCAGGCCAATTCTACTTCTAAAAAGCTCGTTTCTTTAACCATTGCTGCTGTCGTTTCTGCTTTCGTTGTCCTCTCCGTCGCCGGATTTTTGTATTGGCGACGGAGACGGAGGCGTGATACGGGTGATGATAAGACTTTCAGATCCGAAAATAGTAGTAGGTTATGTCCGGCGCCGGCGGTTATTGGTGAGAGTAATAATGGAATTCCTAAATTGAGAAATACTTCTGCTACTAGCTCTGAATTTCTTTACTTGGGTACTTTGGTGAATTCGAGACCGATCGACGATCGCGGTCGTGATCGCTCTGATTCAGGTAATGGTGGTGGTGGTGGTAGAGCAGTGGGTTCGCCGGAGCTTCATCCGCTTCCGCCGCTCAATTATGCCAGGTCCAATGAGAAAAGGTCAATCGGAGATGATGAACAACATGAAGAAGAGGAAGAATTTTACTCTCCTAAAGGTTCTCTTGGCACCGGGAATGGTTCGGGATCTCGGAGAGTGTTTGCGGCGGCGGGTGATTTGCTCGGAAAGCGCAGTGAGAGCTCATCTTCGTATTCGACGTCTAGTGGTTCGGTTTCGCCGGCACGGTCTCGGTCTAAGAGTCTCTCTTTATCACCACCGGCTAGCTTGAGTCCTAGAAGATCCATTCATAACGAATCTTCTAGTTTCTCTGTTTCTACTGCTGCTGTGATTGAGCAGTCGCCGCAGCTCTCTCACGGCGGAGCAGAATCAGAGAGAGTTTTCGAGCAGAGCTCGGCTGCGACTTCGTCGCGAAATTCGAATGTTTCAGATCATAATGTCAAGTTCCCAGTTTTAGATGATTCAAAAAATGGCCATGAAGAATCTCTATCACAATCCTATAATTCAGATCCAGAGAAGGTGTTTCCTACTTCTCCTTGTTTGTCTCCGCTTTCGGACGGCGTTTTAGGGCGAATTCAAGTTCAAATACCGGCCGTATCGAATATTTCGGATTCGGATTCAGTTCCGGATGCAAAAATTAAGCATTTTACTTACTCATTTACTTCATCTTCGCCTTCGTCGTCACCGGAGAGAGTAGTAGAATCGTCTCCGTCTAGAGCATCCAATGTTTCAGATCATAATAGGAGAATTCTGGTATCACCAGAGAGAGTTGTGTTGAGTGATTCAGATTCGTCGAGAAAATCGTCCAAGAATTTTGATACCAATGATGTGGCTCCATTGCAGCCTATTTCAGGTGCACCAGCCCCTCCTCCGCCACCTCCACCGCCGCCACCAGCTCTTCTCAGACGATGGGAAACCCCCATTGCCCCTCCAATACCAATGGAACAATCCATTTCTAGGACGCCTCCTACCTTAGTGCCTCCATCAAGGCCATTTATAGTGGAAAATGTGAAAAATATTTCGCCCATTCAATTGCCACCCTTCAGTAGCAATATTGAGGCATTTGAAGAAACTCCCAAGCCCAAGTTGAAGCCTTTGCATTGGGACAAAGTAAGGGCTAGCTCTGATCGTGAGATGGTGTGGGACCAACTGAGATCAAGCTCTTTTAAAGTGAATGAGGAGATGATCGAAACGTTGTTTGTTGTGAAAACTTCCAACTCGAAGGAGACGACTCCACGCCCTGTTCTACCCTCACCTAACCAAGAGATTGGAGTTCTTGATCCCAAAAAGTCACAAAACATCGCAATTGCACTTAGAGCGCTAAATGTGACCATAGAAGAAGTTTGTGAAGCCCTTTTAGAAGGTAATGCAGATGCACTTGGGACAGAGCTACTTGAAAGTTTATTGAAGATGGCTCCAACAAAAGAAGAAGAACGTAAATTAATGGACATTAAAGACGTTTCGCCTACCAAGCTTGGCCCTGCTGAGAAATTTTTGAAGGCAGTCCTTGATGTTCCTTTTGCATTTAAAAGGGTGGATGCAATGCTTTACATGGCAAATTTTGAGTCTGAGATTGAGTACCTAAAGAGGTCATTTGAAAATCTGGAGACTGCCTGTGAGGAATTGAGGAATAGCAGGATGTTCTTGAAACTTCTGGAAGCTGTGCTCAAGACTGGAAATCGAATGAATGTCGGTACTAATCGTGGAGATGCCCATGCCTTTAAACTCGACACACTTCTCAAGCTTGTCGATGTCAAGGGTGCAGATGGAAAAACCACACTTTTGCATTTTGTTGTACAAGAAATTATAAGAAGTGAAGGGGCTCGTCTCTGTGGCACAAATCAAAATCCAATCTCCAATCCGAGTGATGACATCAAATGTAGGAAACTCGGACTGCAAGTTGTTTCTGGTCTCAGTTCGGAGCTCACCAATGTAAAGAAGGCAGCGTCAATGGATTCCGACGTGCTTGCTGGCGAGGTTGTCAAGCTTTCCAGTGGACTTGACAACATCAGAGAGGCTCTGTATTTAAATGAAGCAGCTGGGCCAAATGAAAGCACGGAAAGGTTTTCAGAGTCAGTGAACAGGTTCTTGAAAATGGCAGAGGAGGAAATCATAAGAATTCAAGCTCTTGAAAGTGTTGCCCTATCTCTAGTGAAGGAGATTACAGAGTACTTCCATGGGAACTCAGCCAAAGAAGAAGCTCATCCATTCAGAATTTTCATGGTGGTGAGAGATTTTCTCACAATTCTAGATGGAGTGTGCAAGGAAGTCGGTATGATAAATGAGCGGACGATAGTGAGTTCCGCCCATAAATTTCCAGTTCCAGTGAACCCAACACTACCACAAGCTTTTGGCAATCATAGAATGCAGAAATACAACTCATCTGATGAAGAAAGTGAGTCACCATAG 3096 45.7 MLPFFFFFFLLPLFIFFSSCNSINIPSTTTHNRRLLHQPFFPLDSFPPSEPPSPPPPTPPNPKYPFSTSPPTTPDGSPFFPTFPTTPPPPAPASFASFPANISSLILPHSPQANSTSKKLVSLTIAAVVSAFVVLSVAGFLYWRRRRRRDTGDDKTFRSENSSRLCPAPAVIGESNNGIPKLRNTSATSSEFLYLGTLVNSRPIDDRGRDRSDSGNGGGGGRAVGSPELHPLPPLNYARSNEKRSIGDDEQHEEEEEFYSPKGSLGTGNGSGSRRVFAAAGDLLGKRSESSSSYSTSSGSVSPARSRSKSLSLSPPASLSPRRSIHNESSSFSVSTAAVIEQSPQLSHGGAESERVFEQSSAATSSRNSNVSDHNVKFPVLDDSKNGHEESLSQSYNSDPEKVFPTSPCLSPLSDGVLGRIQVQIPAVSNISDSDSVPDAKIKHFTYSFTSSSPSSSPERVVESSPSRASNVSDHNRRILVSPERVVLSDSDSSRKSSKNFDTNDVAPLQPISGAPAPPPPPPPPPPALLRRWETPIAPPIPMEQSISRTPPTLVPPSRPFIVENVKNISPIQLPPFSSNIEAFEETPKPKLKPLHWDKVRASSDREMVWDQLRSSSFKVNEEMIETLFVVKTSNSKETTPRPVLPSPNQEIGVLDPKKSQNIAIALRALNVTIEEVCEALLEGNADALGTELLESLLKMAPTKEEERKLMDIKDVSPTKLGPAEKFLKAVLDVPFAFKRVDAMLYMANFESEIEYLKRSFENLETACEELRNSRMFLKLLEAVLKTGNRMNVGTNRGDAHAFKLDTLLKLVDVKGADGKTTLLHFVVQEIIRSEGARLCGTNQNPISNPSDDIKCRKLGLQVVSGLSSELTNVKKAASMDSDVLAGEVVKLSSGLDNIREALYLNEAAGPNESTERFSESVNRFLKMAEEEIIRIQALESVALSLVKEITEYFHGNSAKEEAHPFRIFMVVRDFLTILDGVCKEVGMINERTIVSSAHKFPVPVNPTLPQAFGNHRMQKYNSSDEESESP 1031
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1215988 1219900 - evm.model.ptg000001l.214 HCH5g0214 544366
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0214 1031 Pfam Formin Homology 2 Domain 586 979 IPR015425 -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 390 404 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 1009 1031 - -
HCH5g0214 1031 SUPERFAMILY Formin homology 2 domain (FH2 domain) 518 990 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 357 375 - -
HCH5g0214 1031 Gene3D Formin, FH2 domain 587 1000 IPR042201 -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 203 273 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 242 260 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 47 84 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 448 477 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 448 531 - -
HCH5g0214 1031 PANTHER FORMIN-RELATED 5 1025 IPR027643 GO:0003779(InterPro)|GO:0030036(InterPro)|GO:0045010(InterPro)|GO:0051015(InterPro)
HCH5g0214 1031 MobiDBLite consensus disorder prediction 286 349 - -
HCH5g0214 1031 SMART it6_source 582 994 IPR015425 -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 285 409 - -
HCH5g0214 1031 ProSiteProfiles Formin homology-2 (FH2) domain profile. 582 1005 IPR015425 -
HCH5g0214 1031 Coils Coil 747 774 - -
HCH5g0214 1031 MobiDBLite consensus disorder prediction 512 531 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH1g0118 HCH-Chr1:8760457 HCH5g0214 HCH-Chr5:1215988 1.70E-09 dispersed
HCH2g0022 HCH-Chr2:941933 HCH5g0214 HCH-Chr5:1215988 4.60E-140 dispersed
HCH2g0759 HCH-Chr2:51235032 HCH5g0214 HCH-Chr5:1215988 4.40E-98 dispersed
HCH4g1640 HCH-Chr4:15566808 HCH5g0214 HCH-Chr5:1215988 1.60E-74 dispersed
HCH5g0214 HCH-Chr5:1215988 HCH8g0107 HCH-Chr8:4309375 2.10E-104 dispersed
HCH5g0214 HCH-Chr5:1215988 HCH12g1149 HCH-Chr12:9578757 2.90E-101 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0214 K28090 - csv:101211678 1226.85