Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0294 ATGTTTTGTTATAAGTATTTTAGGAAGAAGTTTTTAAAACAAGATTGTTTTAATAATCAATTCAGTTTTAATTTATTTTGCAAGTGTTCTTTTCCTTTACGTCATGAAACCCCAGCTCATGCTTGTATGTGGGTTCTTATTCACGTTACAAATTCCCCTGAAATTTTTCAAAAGGCCAAGGAAGAACAAGAGTTTATCATAAAAGAAAGGCCTTCTACACAAAAGGGTTTAAATTTTAAGGAAATTAGACAAATGAAATATCTTGCAAAGATAATAAATGAGTCACTGAGAAAAACAACAATATCACTCTCAAGTTTTCGTGAGGCAATAACCGATGTAAATATCAATGGTTACACAATCCCAAAAGGATGGTCTACTCCAATCTGGATTAAAGCTGTTCACATGGACCCTCAAATATATCCAGATCCACAAAAATTTGATCCTTCTAGATGGGATAATTATCGACCCAAGCCAGGCACGTTTATACCATTTGGAATGGGAAATAAGTTTTGCGCCGGAAGTGAACTTGTCAAGCTGGAAATCACCATTTTACTCCATTATTTTCTCCTCAATTACAAATACGGTGAAAAAGGAATATACAAAACTCATCTATATGGAAGGCCAACAATTTTAGTAACAGATGGAGAAGCATGCAGAGATATTCTCAGGAGTGAGAAGCAATTTATCCCAAGTTATCCCACGGCCTTGAAAAAATTACTATCAAAAGATATTTCAGCATATGAAACCCTAAGTTTTGAACTGCACAAACCACTTCATAGACTAACTTCTTCTTTATTGAGTGGTTCTGAGGCATTATCTTCTCACATTGAATTTACACAACATTTTGTAATCAATGCTTTTGATGAATGGGCTTCCATGAAAACACCCATTGAATTAACCAAAGAAATGAAAGCTCTGACATTGAAAATCATATGCAAACTTTTCCTTGGCTCTGCTGTGGAGCCTTATTTGGGACAACTTCAAAAACTTTATATTCAACTTATGGATGGGGTTTTCTCCATTTTTCCTTACGCTTTTCCAGGTTCGACTTTCTACAGAGCAGTTAAGACAAGAGAGGAAATTTCAAAAATCATAAAGGTTATCATGGAGGAGAAGGAAAAAGGAAAGAAAAATATGGAATGTGGACAAGAAAGAAAGTGTCTTTTGGAGATGGTAATGGAAGCAAGGGATGAGAATGGTGGAAAACTATTAGAGGGTGAGCTTATAATAGATCATATTCTGATGCTCGTAATGGCTGGTGAAGACACCACTTCCTGTGCTTCAATGTGGGCGATGAGGTATCTTTCAGAAAACCCAGAGATTTTCAAAAAGGCTAAGGAAGAACAAGAGTTGATTGTAAAGAAAAGACCTTCTTCACAAAAGGGATTGAGCTTTGAAGAAACTAAACAAATGAAATATCTTTCCATGGTAATTAATGAGACCCTGCGTATAAGTAACGTTGCATTTACAAGTTTTCGGGAAGCAAGAGAGGATACAAGCTTCCATGGTTACACCATTCCAAAAGGATGGAATATAACATTGTGGTATAGAGGCATTCATATGAACCCTCTTACTTTTCCAAATCCACAAAACTTTGATCCTTCAAGATGGGATAATATTGTATCAAAGAGAGGTATATTTTTCCCCTTCGGATATGGATATCGATATTGTTGCGGAAGTGAATTCGCCAACCTTGAGCTTACCATTATACTTCATCATTTTCTCCTTTCTTACAAGTTGGAGCTGCTGAATCCAAAATGTAAAGTGAGTCATCTTCCCGTTCCAATGCCCAGAGATAACTGTCTTTCAAGACTTACAAAGCTTGCTTAA 1830 35.9 MFCYKYFRKKFLKQDCFNNQFSFNLFCKCSFPLRHETPAHACMWVLIHVTNSPEIFQKAKEEQEFIIKERPSTQKGLNFKEIRQMKYLAKIINESLRKTTISLSSFREAITDVNINGYTIPKGWSTPIWIKAVHMDPQIYPDPQKFDPSRWDNYRPKPGTFIPFGMGNKFCAGSELVKLEITILLHYFLLNYKYGEKGIYKTHLYGRPTILVTDGEACRDILRSEKQFIPSYPTALKKLLSKDISAYETLSFELHKPLHRLTSSLLSGSEALSSHIEFTQHFVINAFDEWASMKTPIELTKEMKALTLKIICKLFLGSAVEPYLGQLQKLYIQLMDGVFSIFPYAFPGSTFYRAVKTREEISKIIKVIMEEKEKGKKNMECGQERKCLLEMVMEARDENGGKLLEGELIIDHILMLVMAGEDTTSCASMWAMRYLSENPEIFKKAKEEQELIVKKRPSSQKGLSFEETKQMKYLSMVINETLRISNVAFTSFREAREDTSFHGYTIPKGWNITLWYRGIHMNPLTFPNPQNFDPSRWDNIVSKRGIFFPFGYGYRYCCGSEFANLELTIILHHFLLSYKLELLNPKCKVSHLPVPMPRDNCLSRLTKLA 609
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 1800399 1842997 - evm.model.ptg000001l.294 HCH5g0294 544446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0294 609 PRINTS E-class P450 group I signature 408 425 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS E-class P450 group I signature 515 539 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS E-class P450 group I signature 547 557 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS E-class P450 group I signature 475 493 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS E-class P450 group I signature 428 454 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS E-class P450 group I signature 557 580 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 SUPERFAMILY Cytochrome P450 193 597 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 Gene3D Cytochrome P450 34 193 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 Gene3D Cytochrome P450 194 609 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 Pfam Cytochrome P450 198 585 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 Pfam Cytochrome P450 35 193 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS P450 superfamily signature 548 557 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS P450 superfamily signature 419 436 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS P450 superfamily signature 476 487 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PRINTS P450 superfamily signature 557 568 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0294 609 PANTHER CYTOCHROME P450 26 193 583 - GO:0004497(PANTHER)|GO:0005783(PANTHER)|GO:0016125(PANTHER)|GO:0016491(PANTHER)|GO:0051777(PANTHER)
HCH5g0294 609 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 164 173 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH5g0294 609 SUPERFAMILY Cytochrome P450 35 193 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH5g0294 HCH-Chr5:1800399 HCH6g1096 HCH-Chr6:45600658 1.80E-98 dispersed
HCH5g0293 HCH-Chr5:1792219 HCH5g0294 HCH-Chr5:1800399 8.10E-211 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0294 K04123 - csv:105435043 370.933