Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0371 ATGATGAAGATGGAAATGATGGAAGATATGGTGGTAATCGGAGGATTGATCGGAGTGCAGTTTATATACGCCGGAAATTCGGTTTTGCTGAGTTATTTAATGTCGTTGAATATAAATCCTCTCATCATTGTCATTTTTTCTGCCTCTGCTACTTTTCTCCTCCTCTCTCCTCTCGCATTTTATTTTGAAAGGAGCAAATGGCCTAAGAAACTGAGTTTCAAGTTGCTGCTTCAGCTTGTTCTCATTTCCTTCGGAGGTGTAACTTTGTTCCAAACTCTGCTATTGAAAGGGATAAAGCTAACTTCTCCAGCCATGGCAACGGCCATGCCAAACCTTGCTCCTGGCCTCATCTTTATCATTGCTTGGTGTTTTAGATTAGAGAAAGTGAAATTGAGTTGTGTGTACAGCAAAGTTAAGATATTAGGCACATTGCTTTGTGTAGTAGGTGCTATCGCAATGAGCATAATCCAAAGCACCGTCACCCTACCAGTAGAAGAGCAGCTATCATTTCCCCCTCCAATTCTACTCTTGAGCAAGGAAAAGATTGTTGGTTGTTTGTATCTCATGGTCGCAGTCTTCATATTATCAAGCAATGTTGTATTGCAGGCTATGGCTCTTGCTGAATTGCCAGCTCCAATGTCATTGTGTGCCATAACATCTTTCATTGGCGTGTGCACAACTGTGGCTGTACAACTGCTGCAAAGTCATACATTGGAAACTGGTTGGTCCCTTGCCAACCTTAAGGATTTACTTGGCTACTCTCTATTGGGAGGAGTAATGACTGGTGTAAGCTTGAGTTTCAATGGATGGGCAATGAAGAAAAGAGGGCCAGTTTTGGTGTCAATGTTCAGTCCCATTGGAACAGTTTGCTCTGTCATTCTCTCTGTCTTCACCTTAGGAGACACCATTTTCATTGGAAGCCTTGCTGGTATGTTCCTCATGTTCACTGGGCTCTACTTTGTGCTTTGGGCGAAAGGAAAAGAGGATTACTATGATGGGATGAATGGCTATCAAAGCGATGACTTCAACTTTGAGAAACCTTTACTCTCTTGA 1053 42.36 MMKMEMMEDMVVIGGLIGVQFIYAGNSVLLSYLMSLNINPLIIVIFSASATFLLLSPLAFYFERSKWPKKLSFKLLLQLVLISFGGVTLFQTLLLKGIKLTSPAMATAMPNLAPGLIFIIAWCFRLEKVKLSCVYSKVKILGTLLCVVGAIAMSIIQSTVTLPVEEQLSFPPPILLLSKEKIVGCLYLMVAVFILSSNVVLQAMALAELPAPMSLCAITSFIGVCTTVAVQLLQSHTLETGWSLANLKDLLGYSLLGGVMTGVSLSFNGWAMKKRGPVLVSMFSPIGTVCSVILSVFTLGDTIFIGSLAGMFLMFTGLYFVLWAKGKEDYYDGMNGYQSDDFNFEKPLLS 350
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 2411025 2414107 + evm.model.ptg000001l.371 HCH5g0371 544523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0371 350 Pfam EamA-like transporter family 184 322 IPR000620 GO:0016020(InterPro)
HCH5g0371 350 Pfam EamA-like transporter family 16 154 IPR000620 GO:0016020(InterPro)
HCH5g0371 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 240 327 - -
HCH5g0371 350 SUPERFAMILY Multidrug resistance efflux transporter EmrE 53 154 - -
HCH5g0371 350 PANTHER WAT1-RELATED PROTEIN 17 332 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH5g0371 HCH-Chr5:2411025 HCH6g1022 HCH-Chr6:44971429 1.20E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0371 - - - 0.0