Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH5g0407 | ATGAATCAATCAAGCTCTACTTTCCTTCAAACATGGAACTTTCTCTTCACTTTCATATCCATTTCTACCGTTTTCTTCTTCACATGGTCATACCTCAAACTCCGGCATCGGCGTTCCCCGTTACCGCCGGGTCCACCCGGTATTCCACTGCTCGGAAACCTCCCGTTTCTCGACCCCGAGCTTCACACGTACTTCACCGAGCTCGGTCGACGATACGGCCCCATCGTAAAGCTCCATCTTGGTAACAAGATTGGTATCATACTCAACTCACCTTCCATTGCCGGCCAAGTACTAAAAGATCACGATATTACCTTCGCCAACCGAGACGTTTCCGCCGCCGCAAGAGTGCTCGCTTACGGCGGCCGTGATATAGCTTGGAGCTCTTATGGATCCGAATGGCGAATGTTGAGAAAAGTGTGTGTGCTTAAGATGCTTAGCAACCATACTTTAGACTCATTCTATGAATTTCGCCGGCGAGAGGTTAGAACCACCGTCGGTTACTTCTACAGTCTGGCCGGATCTCCGGTTAATATTGGACAAGAAGCTTTCTTGACGTCCCTAAATGTCATGACAAGCATGTTATGGGGCGGGACGACAGTGGACGGAGGAGAGCGAGAGAGTGTCGGAGCGGAGTTTAGAGACGCCGTGTCGGAGATGACGAATCTACTGATAAAGCCAAATATTTCCGACTTCTTTCCGAGCTTGGCTTGGTTTGATTTTCAAGGTATAGAAAAGAAAATGAGGAAGATCGTGCAGGGGTTTGATGAGATATTTGATAAGATGATTAATCGAAGAATGGGAATTAAGGGTTATGGCGGAGATGCAGAGAAAAAGGATTTCTTGCAATTCTTACTGAGGTTGAAGGATGAAGAAGACTCCAAGACACCTTTGACCATGATCCACGTCAAAGCCTTGCTTATGGATATGGTTGTCGGTGGTACGGATACATCCTCAAACGCCATAGAGTTTGCCATGGCAGAGATGATAAAGAATCCAGAAGTGATGAAAAGAGCACAAGAAGAACTAGATTCCGTCGTTGGAAAAGACGACATCGTAGAAGAAACCCACATACAAAATCTGCCATATCTCCAAGCTGTAATGAAAGAAACCTTACGTCTGCATCCAATCCTCCCATTGCTTGTCCCCCACTGCCCTAGCGAGACCACCATTATCGACAACTACACAATCCCAAAGGGCTCTCGAGTCTTCATCAACGTCTGGTCAATTCATCGAGACCCGAAATACTGGGAGAATCCATTGGAGTTTAAACCAGAGAGGTTTTTGAACAGTAAGTGGGATTATAGTGGAAATGATTTGTGTTACTTTCCATTTGGATCTGGAAGAAGAATTTGTGCAGGTATAGCTATGGCTGAAAGGATGTTTATGTATTTGCTTGCTACGCTTTTGCATTCATTTGATTGGAAACTGAAAGAAGGTGAAGAACTGAATGTTGCAGAAAAGTTTGGGATTGTTTTGAAGAAGAAGAAACCTCTTATTGCCATCCCTACACCGAGGTTAGCAGACTCTACTTTCTATTCCATCACCGTTGGAGGAAAGTATAAACCCTAG | 1569 | 45.12 | MNQSSSTFLQTWNFLFTFISISTVFFFTWSYLKLRHRRSPLPPGPPGIPLLGNLPFLDPELHTYFTELGRRYGPIVKLHLGNKIGIILNSPSIAGQVLKDHDITFANRDVSAAARVLAYGGRDIAWSSYGSEWRMLRKVCVLKMLSNHTLDSFYEFRRREVRTTVGYFYSLAGSPVNIGQEAFLTSLNVMTSMLWGGTTVDGGERESVGAEFRDAVSEMTNLLIKPNISDFFPSLAWFDFQGIEKKMRKIVQGFDEIFDKMINRRMGIKGYGGDAEKKDFLQFLLRLKDEEDSKTPLTMIHVKALLMDMVVGGTDTSSNAIEFAMAEMIKNPEVMKRAQEELDSVVGKDDIVEETHIQNLPYLQAVMKETLRLHPILPLLVPHCPSETTIIDNYTIPKGSRVFINVWSIHRDPKYWENPLEFKPERFLNSKWDYSGNDLCYFPFGSGRRICAGIAMAERMFMYLLATLLHSFDWKLKEGEELNVAEKFGIVLKKKKPLIAIPTPRLADSTFYSITVGGKYKP | 522 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2685595 | 2687838 | + | evm.model.ptg000001l.407 | HCH5g0407 | 544559 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH5g0407 | 522 | FunFam | Putative cytochrome P450 superfamily protein | 302 | 503 | - | - | |
| HCH5g0407 | 522 | Pfam | Cytochrome P450 | 42 | 497 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | Gene3D | Cytochrome P450 | 30 | 501 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PANTHER | OS08G0547900 PROTEIN | 10 | 512 | - | - | |
| HCH5g0407 | 522 | PRINTS | P450 superfamily signature | 312 | 329 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | P450 superfamily signature | 365 | 376 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | P450 superfamily signature | 442 | 451 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | SUPERFAMILY | Cytochrome P450 | 42 | 505 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 441 | 451 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 93 | 114 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 321 | 347 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 364 | 382 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 405 | 429 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 69 | 88 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 451 | 474 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | PRINTS | E-class P450 group I signature | 301 | 318 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0407 | 522 | CDD | CYP76-like | 70 | 502 | - | - | |
| HCH5g0407 | 522 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 444 | 453 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH2g0356 | HCH-Chr2:45288194 | HCH5g0407 | HCH-Chr5:2685595 | 1.10E-56 | dispersed | |
| HCH5g0407 | HCH-Chr5:2685595 | HCH8g1251 | HCH-Chr8:47794809 | 6.80E-99 | dispersed | |
| HCH5g0407 | HCH-Chr5:2685595 | HCH5g0408 | HCH-Chr5:2694681 | 1.30E-227 | tandem |
Pathway information