Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH5g0408 | ATGGAACTTACTTTTCTTTCCTTTCTCCCATGGCAAGTCCTCTTCACATTCTTCGCCCTCTTCGCCGCCTTCCTATTCCTCAAACTCCACCGCCGCCGCCTCCCACCACTACCGCCCGGCCCACGTGGCATTCCACTCCTCGGAAACCTCCCCTTCCTCGACCCAGACCTGCACACCTACTTCGCCGATCTCGGCCACCGATACGGCCCGATCGTAAAACTCGGTCTCGGTAACAAGATCGGCATAGTAATCAACTCCCCTTCCATAGCACAACAAGTTCTCAAAGAACAGGACACCACCTTCGCCAACCGCGACGTCCCTGCCGCCGGCCGAGCGGCCACATACGGCGGCTATGACATAGTTTGGACCCCATATGGACCGGAGTGGCGGATGTTGAGAAAAATCTGCGTTCTTAAAATGCTCAGCAACCACACCTTAGACTCCTTCTACAGTCTCCGCCGCCGAGAGGTTAGAAACACCGTCGGGTTCATCTTCGGGCGAGTTGGATCCGCCATTAATATAGGGGAGCAAGTTTTTGTGACCGTTTTGAACGTGATAACAAGCATGTTATGGGGAGGAACGGTGGAGGGAGAAGAGAGGGAAGGGCTTGGGATGGAGTTTAAAGAGGTGGTATCGGATATGACAGAGCAACTTATGAAGCCTAATGTTTCTGATTTCTTTCCGAGTTTGGCTCGTTTTGATATTCAAGGAATAGAGAAGAAGGTGAATAAGCTTGTGGAGAGATTTGATAACATCTTTGAGAAGATGATTGATCAAAGATTGAAAATGGGTGATGTAAATGGAGAGAAAAAGGATTTTTTGCAGTTCTTGTTGGGGATCAAGGATGAAGAAGATTCCAAGACACCTTTTACTATGACCCATCTCAAAGCCTTGCTCATGGATATGGTGGTAGGTGGAACCGACACATCTTCAAACGCCATAGAGTTCGCCATGGCAGAAATGATGAAGAATCCAGAAGTGATGAAAAAGGCCCAAGAAGAGCTTGATTCCGTCGTTGGAAAAGACGACATCGTAGAAGAAACCCACATACAAAATCTGCCATATCTCCAAATTGTAATGAAAGAAACCTTACGTCTGCATCCAATGCTTCCACTACTGGTCCCTCATTGCCCAAGCGAGACAACAACTGTCGAAAATTACAGGATCCCAAAGGGGTCTAGAGTCTTTGTCAATGTCTGGTCTATTCAACGAGACCCGAAATATTGGGAGGATCCATTGGAGTTTAAACCAGAGAGGTTTTTGAAGAGTAAGTGGGATTATAGTGGAAATGATTTGTGTTACTTTCCATTTGGATCTGGAAGAAGAATTTGTGCAGGTATAGCTATGGCTGAAAGGATGTTTATGTATTCTCTTGCTACGCTTTTGCATTCCTTTGATTGGAAGCTGGAAGAAGGTCAGGAATTGGATGTTTCTGAGAAGTTTGGGATTGTTTTGAAGAAGAAGATACCACTTGTTCTTGTCCCAACGCCGAGGTTGGCCGATCCAACTCTATATCAATAG | 1521 | 46.55 | MELTFLSFLPWQVLFTFFALFAAFLFLKLHRRRLPPLPPGPRGIPLLGNLPFLDPDLHTYFADLGHRYGPIVKLGLGNKIGIVINSPSIAQQVLKEQDTTFANRDVPAAGRAATYGGYDIVWTPYGPEWRMLRKICVLKMLSNHTLDSFYSLRRREVRNTVGFIFGRVGSAINIGEQVFVTVLNVITSMLWGGTVEGEEREGLGMEFKEVVSDMTEQLMKPNVSDFFPSLARFDIQGIEKKVNKLVERFDNIFEKMIDQRLKMGDVNGEKKDFLQFLLGIKDEEDSKTPFTMTHLKALLMDMVVGGTDTSSNAIEFAMAEMMKNPEVMKKAQEELDSVVGKDDIVEETHIQNLPYLQIVMKETLRLHPMLPLLVPHCPSETTTVENYRIPKGSRVFVNVWSIQRDPKYWEDPLEFKPERFLKSKWDYSGNDLCYFPFGSGRRICAGIAMAERMFMYSLATLLHSFDWKLEEGQELDVSEKFGIVLKKKIPLVLVPTPRLADPTLYQ | 506 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 2694681 | 2696446 | + | evm.model.ptg000001l.408 | HCH5g0408 | 544560 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH5g0408 | 506 | Gene3D | Cytochrome P450 | 25 | 492 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | FunFam | Cytochrome P450 - like protein | 26 | 492 | - | - | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 65 | 84 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 357 | 375 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 398 | 422 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 434 | 444 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 294 | 311 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 444 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 314 | 340 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 89 | 110 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | E-class P450 group I signature | 181 | 199 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | P450 superfamily signature | 358 | 369 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | P450 superfamily signature | 305 | 322 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | PRINTS | P450 superfamily signature | 435 | 444 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | CDD | CYP76-like | 67 | 495 | - | - | |
| HCH5g0408 | 506 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 437 | 446 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH5g0408 | 506 | PANTHER | OS08G0547900 PROTEIN | 16 | 506 | - | - | |
| HCH5g0408 | 506 | SUPERFAMILY | Cytochrome P450 | 38 | 498 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0408 | 506 | Pfam | Cytochrome P450 | 38 | 488 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH5g0408 | HCH-Chr5:2694681 | HCH8g1251 | HCH-Chr8:47794809 | 5.20E-96 | dispersed | |
| HCH5g0407 | HCH-Chr5:2685595 | HCH5g0408 | HCH-Chr5:2694681 | 1.30E-227 | tandem |
Pathway information