Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0521 | ATGGAGGGTAAGGAAGAGGATGTGAAGTTAGGAGCAAACAAGTACTCAGAGAGACAGCCGATTGGAACATCAGCTCAGACGGACAAGGACTACAAAGAGCCGCCGCCGGCTCCATTGTTCGAGCCCGGGGAGCTGACGTCTTGGTCGTTTTACAGAGCCGGAATCGCTGAGTTCGTGGCAACTTTCTTGTTCCTTTATATCACCATTTTGACTGTCATGGGCGTCAGCAGAGCCCCTTCTAAATGCTCCACTGTTGGCATTCAAGGCATTGCTTGGGCTTTCGGCGGCATGATCTTTGCCCTTGTTTATTGCACCGCCGGCATCTCTGGTGGGCATATAAACCCAGCAGTGACGTTTGGACTATTCCTGGCGAGGAAGCTGTCTCTAACGAGAGCTGTGTTCTACATTATCATGCAATGTCTCGGAGCCATTTGCGGCGCGGGTGTTGTGAAGGGCTTTGAGAAGTCCATCTACGAGCAGAAGATGGGCGGCGCTAACGTTGTCGCTCACGGCTACACCAAGGGCGACGGCCTCGGCGCTGAGATTATTGGTACCTTTGTTCTTGTTTATACTGTTTTCTCTGCCACTGATGCCAAGAGAAACGCCAGAGACTCTCATGTCCCTATTTTGGCTCCTCTCCCCATCGGTTTCGCAGTGTTTTTGGTTCATTTGGCCACAATCCCCATCACTGGAACTGGTATCAACCCTGCAAGGAGCCTTGGAGCTGCAATCATCTACAACAAACAGCATGCTTGGGATGATCATTGGATTTTCTGGGTGGGACCCTTCATTGGAGCTGCTCTTGCTGCTATTTACCACCAGATCATCATCAGAGCTATTCCTTTCAAGTCCAGGGCTTGA | 861 | 50.99 | MEGKEEDVKLGANKYSERQPIGTSAQTDKDYKEPPPAPLFEPGELTSWSFYRAGIAEFVATFLFLYITILTVMGVSRAPSKCSTVGIQGIAWAFGGMIFALVYCTAGISGGHINPAVTFGLFLARKLSLTRAVFYIIMQCLGAICGAGVVKGFEKSIYEQKMGGANVVAHGYTKGDGLGAEIIGTFVLVYTVFSATDAKRNARDSHVPILAPLPIGFAVFLVHLATIPITGTGINPARSLGAAIIYNKQHAWDDHWIFWVGPFIGAALAAIYHQIIIRAIPFKSRA | 286 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 3561664 | 3563645 | + | evm.model.ptg000001l.521 | HCH5g0521 | 544673 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0521 | 286 | PANTHER | AQUAPORIN OR AQUAGLYCEROPORIN RELATED | 5 | 284 | IPR034294 | GO:0005773(PANTHER)|GO:0005886(PANTHER)|GO:0009414(PANTHER)|GO:0009506(PANTHER)|GO:0015250(PANTHER) | |
HCH5g0521 | 286 | Pfam | Major intrinsic protein | 44 | 273 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | NCBIfam | MIP family channel protein | 56 | 272 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | FunFam | Probable aquaporin PIP1-2 | 37 | 286 | - | - | |
HCH5g0521 | 286 | CDD | MIP | 52 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | Gene3D | Glycerol uptake facilitator protein. | 37 | 284 | IPR023271 | - | |
HCH5g0521 | 286 | PRINTS | Major intrinsic protein family signature | 180 | 198 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | PRINTS | Major intrinsic protein family signature | 256 | 276 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | PRINTS | Major intrinsic protein family signature | 52 | 71 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | PRINTS | Major intrinsic protein family signature | 94 | 118 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | PRINTS | Major intrinsic protein family signature | 131 | 150 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | PRINTS | Major intrinsic protein family signature | 216 | 238 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0521 | 286 | MobiDBLite | consensus disorder prediction | 1 | 35 | - | - | |
HCH5g0521 | 286 | ProSitePatterns | MIP family signature. | 112 | 120 | IPR022357 | - | |
HCH5g0521 | 286 | SUPERFAMILY | Aquaporin-like | 44 | 278 | IPR023271 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g0391 | HCH-Chr1:51794234 | HCH5g0521 | HCH-Chr5:3561664 | 7.60E-140 | dispersed | |
HCH1g0392 | HCH-Chr1:51802537 | HCH5g0521 | HCH-Chr5:3561664 | 2.00E-140 | dispersed | |
HCH2g0514 | HCH-Chr2:48862870 | HCH5g0521 | HCH-Chr5:3561664 | 8.00E-18 | dispersed | |
HCH5g0521 | HCH-Chr5:3561664 | HCH9g0588 | HCH-Chr9:3961959 | 1.20E-108 | dispersed | |
HCH5g0521 | HCH-Chr5:3561664 | HCH2g1176 | HCH-Chr2:54284098 | 3.20E-111 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH5g0521 | K09872 | - | csv:101217440 | 543.117 |