Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0522 ATGGATACGACGGCGGTGGCGGCGGCGATCTTATCAGTCGTGGTGGCGTATTTGATTTGGTTCTTCAACATCAAGCGATCGTTGAGTGGTCCACGTGTCTGGCCACTATTCGGCAGTCTTCCTGGCTTGATCAAAAACAGCCATCGCATGCATGATTGGATTGCAGAGAATCTTCGCTCGAGTGGCGGCACGTACCAGACTTGCACGTGTGCCGTCCCCTTCCTGGCTAAAAAACAAGGCCTCGTGACCGTCACGTGCGACCCGAAGAATTTGGAGCATATTCTCAAGACCCGGTTCGAGAATTACCCGAAAGGGCCCAATTGGCAGGCCGTGTTTCACGATCTGCTTGGTGATGGAATCTTCAACTCCGATGGAGACACGTGGCTGTTCCAGCGTAAGACTGCCGCACTGGAATTCACCACCAGGACGCTCAGACAAGCCATGGCTCGATGGGTGAGCCGAGCCATCAAGTTCAGATTCTGCCCGATTCTTGAAACGGCTCAAAGTAAAGCGGAGCCGGTCGATCTTCAAGACCTTTTACTTCGGCTCACGTTTGATAATATATGCGGCTTGACTTTTGGTAAGGACCCACAGACTCTCTCTCCTGACCTGCCCGAAAACGGCTTCGCTTTGGCTTTCGATCGAGCCACGGAAGCCTCGTTACGGCGCTTTATTTTGCCTAATGTAATTTGGAAGCTGAAGAAATGGCTACGGCTTGGGATGGAGGTTACTTTGAGTCACAGCCTCCAACACACGGATCAGTACCTGACCAATATCATTACGACACGTAAGCTGGAATTGTCCAATCAGCAACTAGATGAAGGCGGTGGGACCCCACGCAGTCACGGTCACAGTCACGATGACTTGCTGTCTAGATTCATGAAGAAAAAAGAATCCTACTCGGACAAGTTCCTGCAACACGTGGCACTCAATTTCATCCTAGCTGGACGTGACACGTCATCCGTCGCGCTGAGCTGGTTCTTCTGGTTGGTCACGAAAAACCCGAGAGTGGAAGAGAAAATCCTCATCGAAATCTGCACCGTCCTTATGGAGACACGTGGCAGTGAGATCTCCACGTGGCTGGAAGAGCCACTTGTCTTTGAAGAAGTTGACCGGTTGACTTACCTCAAGGCAGCGTTGTCTGAGACTCTTAGACTCTACCCTTCTGTACCACAAGACTCTAAGCATGTAGTAAACGACGACGTTTTCCCCACCGGAGCTTTCGTCCCCGCCGGCTCATCGATCACTTATTCGATATACGCCATTGGTCGTATGAAATTCATTTGGGGAGAAGATTGCTTAGAGTTCAAACCGGAAAGATGGTTGGCTGTTGACAAGAAGAAAATTGAGCTTCAAGATGCATACAAATTTGCTGCATTTAACGCTGGCCCAAGGATATGCCTAGGAAAGGATTTAGCTTACTTGCAAATGAAGTCGATCGCGGCTGCTGTGCTGCTCCGACACCGCCTAACGTTGGTGCCCGGCCACAGTGTCGAGCAAAAGATGTCATTGACATTGTTCATGAAGTATGGACTCAAAGTTCATCTGCACCCAAGAGAGCTCAGCCATATAGTGGAAACAATCAACAAGTCGATGGTCGAAACGGTAAGCGCAGCCCCTTAA 1623 50.22 MDTTAVAAAILSVVVAYLIWFFNIKRSLSGPRVWPLFGSLPGLIKNSHRMHDWIAENLRSSGGTYQTCTCAVPFLAKKQGLVTVTCDPKNLEHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKFRFCPILETAQSKAEPVDLQDLLLRLTFDNICGLTFGKDPQTLSPDLPENGFALAFDRATEASLRRFILPNVIWKLKKWLRLGMEVTLSHSLQHTDQYLTNIITTRKLELSNQQLDEGGGTPRSHGHSHDDLLSRFMKKKESYSDKFLQHVALNFILAGRDTSSVALSWFFWLVTKNPRVEEKILIEICTVLMETRGSEISTWLEEPLVFEEVDRLTYLKAALSETLRLYPSVPQDSKHVVNDDVFPTGAFVPAGSSITYSIYAIGRMKFIWGEDCLEFKPERWLAVDKKKIELQDAYKFAAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTLVPGHSVEQKMSLTLFMKYGLKVHLHPRELSHIVETINKSMVETVSAAP 540
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 3564107 3565729 - evm.model.ptg000001l.522 HCH5g0522 544674
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0522 540 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 460 469 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
HCH5g0522 540 PRINTS P450 superfamily signature 315 332 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS P450 superfamily signature 378 389 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS P450 superfamily signature 458 467 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS P450 superfamily signature 467 478 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 Gene3D Cytochrome P450 12 523 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 CDD CYP86A 68 512 - -
HCH5g0522 540 PANTHER CYTOCHROME P450 19 512 - -
HCH5g0522 540 PRINTS E-class P450 group I signature 324 350 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS E-class P450 group I signature 377 395 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS E-class P450 group I signature 467 490 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS E-class P450 group I signature 304 321 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 PRINTS E-class P450 group I signature 457 467 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 FunFam Cytochrome P450 22 522 - -
HCH5g0522 540 SUPERFAMILY Cytochrome P450 27 519 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0522 540 Pfam Cytochrome P450 29 507 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g1139 HCH-Chr4:7470329 HCH5g0522 HCH-Chr5:3564107 1.10E-123 dispersed
HCH5g0522 HCH-Chr5:3564107 HCH9g1269 HCH-Chr9:37181708 3.80E-97 dispersed
HCH3g1432 HCH-Chr3:52232360 HCH5g0522 HCH-Chr5:3564107 1.40E-192 transposed
HCH13g1126 HCH-Chr13:37095798 HCH5g0522 HCH-Chr5:3564107 1.50E-237 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0522 K15398 - csv:101216733 895.19