Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH5g0522 | ATGGATACGACGGCGGTGGCGGCGGCGATCTTATCAGTCGTGGTGGCGTATTTGATTTGGTTCTTCAACATCAAGCGATCGTTGAGTGGTCCACGTGTCTGGCCACTATTCGGCAGTCTTCCTGGCTTGATCAAAAACAGCCATCGCATGCATGATTGGATTGCAGAGAATCTTCGCTCGAGTGGCGGCACGTACCAGACTTGCACGTGTGCCGTCCCCTTCCTGGCTAAAAAACAAGGCCTCGTGACCGTCACGTGCGACCCGAAGAATTTGGAGCATATTCTCAAGACCCGGTTCGAGAATTACCCGAAAGGGCCCAATTGGCAGGCCGTGTTTCACGATCTGCTTGGTGATGGAATCTTCAACTCCGATGGAGACACGTGGCTGTTCCAGCGTAAGACTGCCGCACTGGAATTCACCACCAGGACGCTCAGACAAGCCATGGCTCGATGGGTGAGCCGAGCCATCAAGTTCAGATTCTGCCCGATTCTTGAAACGGCTCAAAGTAAAGCGGAGCCGGTCGATCTTCAAGACCTTTTACTTCGGCTCACGTTTGATAATATATGCGGCTTGACTTTTGGTAAGGACCCACAGACTCTCTCTCCTGACCTGCCCGAAAACGGCTTCGCTTTGGCTTTCGATCGAGCCACGGAAGCCTCGTTACGGCGCTTTATTTTGCCTAATGTAATTTGGAAGCTGAAGAAATGGCTACGGCTTGGGATGGAGGTTACTTTGAGTCACAGCCTCCAACACACGGATCAGTACCTGACCAATATCATTACGACACGTAAGCTGGAATTGTCCAATCAGCAACTAGATGAAGGCGGTGGGACCCCACGCAGTCACGGTCACAGTCACGATGACTTGCTGTCTAGATTCATGAAGAAAAAAGAATCCTACTCGGACAAGTTCCTGCAACACGTGGCACTCAATTTCATCCTAGCTGGACGTGACACGTCATCCGTCGCGCTGAGCTGGTTCTTCTGGTTGGTCACGAAAAACCCGAGAGTGGAAGAGAAAATCCTCATCGAAATCTGCACCGTCCTTATGGAGACACGTGGCAGTGAGATCTCCACGTGGCTGGAAGAGCCACTTGTCTTTGAAGAAGTTGACCGGTTGACTTACCTCAAGGCAGCGTTGTCTGAGACTCTTAGACTCTACCCTTCTGTACCACAAGACTCTAAGCATGTAGTAAACGACGACGTTTTCCCCACCGGAGCTTTCGTCCCCGCCGGCTCATCGATCACTTATTCGATATACGCCATTGGTCGTATGAAATTCATTTGGGGAGAAGATTGCTTAGAGTTCAAACCGGAAAGATGGTTGGCTGTTGACAAGAAGAAAATTGAGCTTCAAGATGCATACAAATTTGCTGCATTTAACGCTGGCCCAAGGATATGCCTAGGAAAGGATTTAGCTTACTTGCAAATGAAGTCGATCGCGGCTGCTGTGCTGCTCCGACACCGCCTAACGTTGGTGCCCGGCCACAGTGTCGAGCAAAAGATGTCATTGACATTGTTCATGAAGTATGGACTCAAAGTTCATCTGCACCCAAGAGAGCTCAGCCATATAGTGGAAACAATCAACAAGTCGATGGTCGAAACGGTAAGCGCAGCCCCTTAA | 1623 | 50.22 | MDTTAVAAAILSVVVAYLIWFFNIKRSLSGPRVWPLFGSLPGLIKNSHRMHDWIAENLRSSGGTYQTCTCAVPFLAKKQGLVTVTCDPKNLEHILKTRFENYPKGPNWQAVFHDLLGDGIFNSDGDTWLFQRKTAALEFTTRTLRQAMARWVSRAIKFRFCPILETAQSKAEPVDLQDLLLRLTFDNICGLTFGKDPQTLSPDLPENGFALAFDRATEASLRRFILPNVIWKLKKWLRLGMEVTLSHSLQHTDQYLTNIITTRKLELSNQQLDEGGGTPRSHGHSHDDLLSRFMKKKESYSDKFLQHVALNFILAGRDTSSVALSWFFWLVTKNPRVEEKILIEICTVLMETRGSEISTWLEEPLVFEEVDRLTYLKAALSETLRLYPSVPQDSKHVVNDDVFPTGAFVPAGSSITYSIYAIGRMKFIWGEDCLEFKPERWLAVDKKKIELQDAYKFAAFNAGPRICLGKDLAYLQMKSIAAAVLLRHRLTLVPGHSVEQKMSLTLFMKYGLKVHLHPRELSHIVETINKSMVETVSAAP | 540 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 3564107 | 3565729 | - | evm.model.ptg000001l.522 | HCH5g0522 | 544674 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH5g0522 | 540 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 460 | 469 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH5g0522 | 540 | PRINTS | P450 superfamily signature | 315 | 332 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | P450 superfamily signature | 378 | 389 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | P450 superfamily signature | 458 | 467 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | P450 superfamily signature | 467 | 478 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | Gene3D | Cytochrome P450 | 12 | 523 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | CDD | CYP86A | 68 | 512 | - | - | |
| HCH5g0522 | 540 | PANTHER | CYTOCHROME P450 | 19 | 512 | - | - | |
| HCH5g0522 | 540 | PRINTS | E-class P450 group I signature | 324 | 350 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | E-class P450 group I signature | 377 | 395 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | E-class P450 group I signature | 467 | 490 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | E-class P450 group I signature | 304 | 321 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | PRINTS | E-class P450 group I signature | 457 | 467 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | FunFam | Cytochrome P450 | 22 | 522 | - | - | |
| HCH5g0522 | 540 | SUPERFAMILY | Cytochrome P450 | 27 | 519 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0522 | 540 | Pfam | Cytochrome P450 | 29 | 507 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH4g1139 | HCH-Chr4:7470329 | HCH5g0522 | HCH-Chr5:3564107 | 1.10E-123 | dispersed | |
| HCH5g0522 | HCH-Chr5:3564107 | HCH9g1269 | HCH-Chr9:37181708 | 3.80E-97 | dispersed | |
| HCH3g1432 | HCH-Chr3:52232360 | HCH5g0522 | HCH-Chr5:3564107 | 1.40E-192 | transposed | |
| HCH13g1126 | HCH-Chr13:37095798 | HCH5g0522 | HCH-Chr5:3564107 | 1.50E-237 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH5g0522 | K15398 | - | csv:101216733 | 895.19 |