Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0599 | ATGCCGGAATCAGAGAATGGAGCGTCGGCGCCGGCGACACCGGGGACGCCGGGGGGACCGTTGTTTTCAAGTTTGAGGGTGGATTCGTTGTCGTACGATCGGAAGTCAATGCCCCGGTGCAAGTGCTTCCCCGTGACTGCTCCCACGTGGGGTCAGTCTCACACGTGCTTTACTGACTTCCCTTCTCCGGATGTTTCTCTCACCCGGAAGCTTGGTGCAGAATTTGTGGGGACATTTATCCTGATATTCGGAGCAACGGCGGGACCGATCGTTAACCAAAAGTACAACGGCGTCGAGACATTGATCGGCAATGCAGCCTGCGCTGGGCTGGCGGTGATGGTGGTGATTCTATCGACGGGTCATATATCAGGAGCTCATCTCAATCCATCCCTCACCATTGCATTTGCAGCTCTAAGACACTTCCCATGGGTTCAAGTTCCAGCATACATTGCAGCCCAGGTCTCTGCCTCTATCTGTGCTTCTTTTGCTCTCAAAGGTGTTTTTCATCCCTTCATGTCCGGCGGTGTCACCGTTCCTTCCGTTAGCACCGGACAGGCTTTCGCTCTCGAATTCATCATCACTTTCAATCTCTTGTTCGTCGTCACTGCTGTTGCCACTGATACTCGTGCGGTGGGAGAGATGGCTGGCATTGCGGTCGGAGCTACAGTGTTGCTCAACATTCTAGTAGCAGGGCCATCAACTGGCGCTTCAATGAATCCAGTGCGCACTCTTGGCCCAGCCGTTGCAGCCGGGAATTACAAGGCATTGTGGATATACCTGGTGGCGCCTACGCTGGGAGCGATCGTGGGGGCCGGAACCTACACGGCGGTGAAGCTGAGAGACGATGAGGTCGATGAACCTCAGCGACAGGCACGGAGCTTCCGCTAA | 888 | 55.18 | MPESENGASAPATPGTPGGPLFSSLRVDSLSYDRKSMPRCKCFPVTAPTWGQSHTCFTDFPSPDVSLTRKLGAEFVGTFILIFGATAGPIVNQKYNGVETLIGNAACAGLAVMVVILSTGHISGAHLNPSLTIAFAALRHFPWVQVPAYIAAQVSASICASFALKGVFHPFMSGGVTVPSVSTGQAFALEFIITFNLLFVVTAVATDTRAVGEMAGIAVGATVLLNILVAGPSTGASMNPVRTLGPAVAAGNYKALWIYLVAPTLGAIVGAGTYTAVKLRDDEVDEPQRQARSFR | 295 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4136146 | 4140000 | + | evm.model.ptg000001l.599 | HCH5g0599 | 544751 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0599 | 295 | SUPERFAMILY | Aquaporin-like | 66 | 284 | IPR023271 | - | |
HCH5g0599 | 295 | ProSitePatterns | MIP family signature. | 126 | 134 | IPR022357 | - | |
HCH5g0599 | 295 | MobiDBLite | consensus disorder prediction | 1 | 21 | - | - | |
HCH5g0599 | 295 | PRINTS | Major intrinsic protein family signature | 108 | 132 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | PRINTS | Major intrinsic protein family signature | 257 | 277 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | PRINTS | Major intrinsic protein family signature | 69 | 88 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | PRINTS | Major intrinsic protein family signature | 220 | 242 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | PRINTS | Major intrinsic protein family signature | 145 | 164 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | PRINTS | Major intrinsic protein family signature | 189 | 207 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | Gene3D | Glycerol uptake facilitator protein. | 54 | 291 | IPR023271 | - | |
HCH5g0599 | 295 | FunFam | Aquaporin NIP2-1 | 57 | 289 | - | - | |
HCH5g0599 | 295 | Pfam | Major intrinsic protein | 65 | 274 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
HCH5g0599 | 295 | PANTHER | AQUAPORIN NIP2-1 | 64 | 281 | IPR034294 | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH5g0599 | HCH-Chr5:4136146 | HCH6g0285 | HCH-Chr6:3991730 | 6.80E-88 | dispersed | |
HCH5g0599 | HCH-Chr5:4136146 | HCH9g0227 | HCH-Chr9:1349192 | 2.50E-50 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH5g0599 | K09874 | - | csv:101212651 | 540.036 |