Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0644 | ATGGGTTGCGGTTCGGATTCGAAGTTGAGTAATTTTGTGGATGAAGATCGTGATTTTGTCGAGAAAGATCCAACGGGACGATACATACGGTACGCTGAACTTTTGGGGAAAGGAGCATTTAAGACAGTATACAGAGGATTTGATGAAGTTAATGGAATAGAAGTTGCTTGGAGCCAAGTGGATATCGAAGATGTTTTGGAGTCACCGGAACAACTTCAAAGATTATACTCTGAGGTTCATCTGCTGAAATCACTAAAACATGAAAATATCATCAAGCTGTACAACTATTGGGTTGATGATAGTAGTAAGACTATCAACATGATTACGGAGTTGTTCACTTCTGGGAGCTTGAGACAATACCGAAGGAAGCACAAGAAGATTGACCTTAAGGCTTTCAAGAACTGGGCGAGACAGATACTTCGGGGTTTAAGCTATCTGCATAGTCACAATCCCCCAATTATCCACAGGGATTTGAAATGCGATAATATATTTGTTAATGGCAACACTGGACAAGTTAAAATTGGAGATCTTGGATTGGCAATTGTCATGCAGCAGCCTACCGCTCGAAGTGTTATTGGCACTCCAGAGTTCATGGCTCCAGAGCTTTATGATGAGGAATACAATGAGCTTGTTGACATATATTCTTTTGGCATGAGCATGTTAGAAGTTGTTACTTGTGAATACCCGTATAGTGAGTGCAAAAATTCTGCTCAAATATACAAGAAGGTTACTTCTGGCATAAAGCCGTCCTCCCTTGACAAAGTGGCAGACCCTCTAGTTAAGCAGTTCATAGAGAAGTGTTTGGTTCCAGCATCCATGAGATTACCTGCAAGTGAACTCTTGAAAGATCCTTTCCTTGCAACTGAAAATCCCAAGGACCTCAGTTCCAATCCTTCTAGATTATTGAATCCTCAGTTTAACTTCAATTTCGTAATTCCTCAACTGCTGGATTCTCATCCAATGGACATAGACCCAAACTGCAGCAAACTCTCAGCCTCAGTGAGCTCATCTAATAAAAGCAGTAATGAAGTCTCTCACTTTTCAACTCTGGAACTTCAGAGGTTCACTGAGAGTGCCCGATTGACGATGAAAGGGGAGATGACTGACCATAATACAATTTCATTCTGTTTGCGCATTTCTGAACGATGTGGTAAAGCTACGGATATCAATTTTCCCTTTTATCTTGATACTGATACTGCTTCTGCAATTGCTAAGGAGATGGTTGAAGAACTTGTTCTGTCAAATGATAAAGCAATTATCATATCTAGGCTAATTGATGAACTACTGACGAAGTTTGTTCCCTCCTGGAAACTACGTACAAGTTATTGTCATGGAAAAAATACTGCAAACAGGAGTACTTCTGAAACTCTAGAGGATAAAACCTTTATTCCTCCTTTCTACTCTGAGCAAGTAGTGGCATCTTCCATGGTGGGTTCTGGGCCACCTCCATTGCATTCGACTGGGGTGAAAGATCAAGAAAACAAGCATTCTATTATTTCATGTGTATCTCTAGACTACGATCACTCCGATGCCTCGAATGACAGTGTTGGAAAAAGATCAGAATGTGATGACTGCAGCCGCCAGCAAAGTGGCAAAGCTTCAAGTGGTGATGTTATTGATTTGGATCCTGTTAGATCTGTTTCGATGATTGATTTCGCTAAACAGTCTCAAATTTCGACATGCTCCGGATTGTCAAAAGATGTTAGTTTTTCCAGTTTTTCCTCACTCTCTCTGGAAGAAAGAGATCACTACGATGAATTCAAGTCAGAGATTGATGCTATTGATCTGCAGTACCACCAGTGCCTTTGTGAACTATCAAGAATGAGAGAGGAAGCAATAGGAAATGTCAAAAAGAAGTGGATGTCAAAGATGAAAGCTTCTGCTGTTTGA | 1890 | 40.58 | MGCGSDSKLSNFVDEDRDFVEKDPTGRYIRYAELLGKGAFKTVYRGFDEVNGIEVAWSQVDIEDVLESPEQLQRLYSEVHLLKSLKHENIIKLYNYWVDDSSKTINMITELFTSGSLRQYRRKHKKIDLKAFKNWARQILRGLSYLHSHNPPIIHRDLKCDNIFVNGNTGQVKIGDLGLAIVMQQPTARSVIGTPEFMAPELYDEEYNELVDIYSFGMSMLEVVTCEYPYSECKNSAQIYKKVTSGIKPSSLDKVADPLVKQFIEKCLVPASMRLPASELLKDPFLATENPKDLSSNPSRLLNPQFNFNFVIPQLLDSHPMDIDPNCSKLSASVSSSNKSSNEVSHFSTLELQRFTESARLTMKGEMTDHNTISFCLRISERCGKATDINFPFYLDTDTASAIAKEMVEELVLSNDKAIIISRLIDELLTKFVPSWKLRTSYCHGKNTANRSTSETLEDKTFIPPFYSEQVVASSMVGSGPPPLHSTGVKDQENKHSIISCVSLDYDHSDASNDSVGKRSECDDCSRQQSGKASSGDVIDLDPVRSVSMIDFAKQSQISTCSGLSKDVSFSSFSSLSLEERDHYDEFKSEIDAIDLQYHQCLCELSRMREEAIGNVKKKWMSKMKASAV | 629 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 4601707 | 4604527 | - | evm.model.ptg000001l.644 | HCH5g0644 | 544796 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0644 | 629 | MobiDBLite | consensus disorder prediction | 512 | 539 | - | - | |
HCH5g0644 | 629 | MobiDBLite | consensus disorder prediction | 512 | 526 | - | - | |
HCH5g0644 | 629 | FunFam | Probable serine/threonine-protein kinase WNK1 | 14 | 110 | - | - | |
HCH5g0644 | 629 | PANTHER | SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED | 15 | 532 | IPR050588 | GO:0004674(PANTHER)|GO:0005737(PANTHER)|GO:0006468(PANTHER)|GO:0035556(PANTHER) | |
HCH5g0644 | 629 | SMART | serkin_6 | 29 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH5g0644 | 629 | SUPERFAMILY | Protein kinase-like (PK-like) | 31 | 344 | IPR011009 | - | |
HCH5g0644 | 629 | Gene3D | - | 371 | 463 | - | - | |
HCH5g0644 | 629 | Gene3D | Transferase(Phosphotransferase) domain 1 | 112 | 293 | - | - | |
HCH5g0644 | 629 | CDD | STKc_WNK | 27 | 286 | - | - | |
HCH5g0644 | 629 | ProSiteProfiles | Protein kinase domain profile. | 29 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH5g0644 | 629 | Pfam | Oxidative-stress-responsive kinase 1 C-terminal domain | 374 | 428 | IPR024678 | GO:0004674(InterPro)|GO:0005524(InterPro) | |
HCH5g0644 | 629 | FunFam | probable serine/threonine-protein kinase WNK9 | 112 | 291 | - | - | |
HCH5g0644 | 629 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 153 | 165 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH5g0644 | 629 | Gene3D | Phosphorylase Kinase; domain 1 | 12 | 110 | - | - | |
HCH5g0644 | 629 | Pfam | Protein kinase domain | 32 | 286 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH5g0644 | HCH-Chr5:4601707 | HCH7g1726 | HCH-Chr7:49040484 | 9.50E-164 | dispersed | |
HCH5g0644 | HCH-Chr5:4601707 | HCH10g0772 | HCH-Chr10:7501607 | 5.80E-121 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81508 | PF00069 | Pkinase | 2.00E-51 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH5g0644 | K08867 | - | csv:101207748 | 828.935 |