Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0656 ATGGCCGGCTCTTGGAGAGCTTCAGGATCTCTGATTGTGCTTGCAATCATTGCATTTGGATGTTTGTTTGCGATTTCCATTGCGAAAGAGGAAGCTACGAAATTGGGAACTGTTATTGGGATAGATCTGGGAACCACTTATTCTTGTGTGGGAGTTTACAAGAATGGGCATGTGGAGATTATAGCGAATGACCAAGGAAACCGTATTACCCCGTCTTGGGTTGCGTTCACTGATAATGAGAGATTGATCGGTGAGGCTGCGAAGAATCAAGCAGCTGTTAATCCTGAAAGGACAGTCTTTGATGTTAAGAGGCTTATTGGTAGAAAGTTTGAAGATAAAGAGGTTCAGAAGGACATTAAGCTCTTTCCGTATAAGATTGTGAATCGGGATGGGAAACCTTACATTCAAGTAAAGATCAAGGATGGTGAGACCAAGGTTTTCAGCCCTGAGGAGGTCAGTGCTATGATTCTTACTAAGATGAAGGAAACAGCCGAAGCATTCCTCGGGAAGAAAATTAAGGATGCCGTCGTCACTGTTCCAGCTTACTTTAATGATGCCCAGAGGCAGGCAACCAAGGATGCCGGTATCATTGCTGGCCTTAATGTTGCTAGGATTATCAATGAACCTACTGCGGCTGCCATTGCATATGGTCTGGACAAGAAAGGTGGCGAGAAGAACATTCTCGTTTTTGACCTTGGTGGTGGAACATTTGATGTCAGTATCTTGACAATTGATAACGGTGTTTTTGAAGTTCTTGCCACCAATGGAGACACCCATTTGGGAGGTGAGGATTTTGACCAGAGGATTATGGAATATTTCATCAAATTGATTAAGAAGAAACACGGGAAGGATATCAGCAAGGACAACCGAGCTCTTGGAAAGCTTAGAAGAGAAGCTGAGCGTGCCAAGAGAGCATTGAGTAGTCAGCACCAAGTCCGTGTGGAGATTGAATCACTTTTTGATGGTACAGACTTCTCCGAGCCACTGACCAGAGCTCGATTTGAAGAGTTGAACAATGACTTGTTCAGGAAGACCATGGGACCTGTGAAGAAGGCAATGGAAGATGCAGGATTGGCAAAGAACCAAATTGATGAGATTGTCCTTGTTGGTGGAAGCACCAGGATTCCAAAAGTACAACAGCTTCTCAAAGACTACTTTGACGGCAAGGAACCCAACAAGGGTGTGAACCCAGATGAGGCAGTTGCTTATGGTGCTGCTGTACAAGGAAGCATCTTGAGCGGAGAGGGTGGTGATGAAACCAAAGATATCCTTCTTCTTGACGTTGCTCCTCTTACACTTGGAATTGAAACTGTTGGTGGAGTGATGACCAAATTGATTCCAAGAAACACTGTCATCCCTACGAAGAAATCTCAAGTTTTCACCACTTACCAGGATCAGCAGACGACTGTCTCTATTCAGGTCTTTGAAGGTGAGAGGAGCCTCACAAAGGACTGCAGGTCGCTTGGGAAATTTGATCTTTCTGGAATTCCTCCTTCTCCAAGGGGAACCCCACAAATCGAGGTCACATTTGAAGTTGATGCAAATGGTATTCTCAATGTTAAGGCAGAAGATAAGGGCACTGGTAAATCCGAGAAGATCACCATCACCAACGACAAGGGTCGGTTGAGCCAGGAAGAGATTGACCGGATGGTTCGTGAAGCAGAAGAGTTCGCTGAGGAAGACAAGAAGGTGAAGGAAAGGATCGACGCCCGCAATGGCCTGGAAACTTATGTATACAACATGAAAAACCAGATTAGCGACAAAGACAAGCTTGCCGACAAGCTCGAGTCTGATGAGAAGGAGAAGATTGAGACCGCCGTGAAGGACGCGCTTGAATGGCTTGATGACAACCAAAGTGCTGAAAAAGAAGATTATGAAGAGAAGCTCAAGGAGGTCGAAGCCGTCTGCAACCCCATTATCACTTCCGTTTATCAGAGGTCCGGTGGTGCTCCTGGTGGTGGCGAGTCTGCAGAAGATGATGAGTCACACGACGAGCTGTGA 2001 45.73 MAGSWRASGSLIVLAIIAFGCLFAISIAKEEATKLGTVIGIDLGTTYSCVGVYKNGHVEIIANDQGNRITPSWVAFTDNERLIGEAAKNQAAVNPERTVFDVKRLIGRKFEDKEVQKDIKLFPYKIVNRDGKPYIQVKIKDGETKVFSPEEVSAMILTKMKETAEAFLGKKIKDAVVTVPAYFNDAQRQATKDAGIIAGLNVARIINEPTAAAIAYGLDKKGGEKNILVFDLGGGTFDVSILTIDNGVFEVLATNGDTHLGGEDFDQRIMEYFIKLIKKKHGKDISKDNRALGKLRREAERAKRALSSQHQVRVEIESLFDGTDFSEPLTRARFEELNNDLFRKTMGPVKKAMEDAGLAKNQIDEIVLVGGSTRIPKVQQLLKDYFDGKEPNKGVNPDEAVAYGAAVQGSILSGEGGDETKDILLLDVAPLTLGIETVGGVMTKLIPRNTVIPTKKSQVFTTYQDQQTTVSIQVFEGERSLTKDCRSLGKFDLSGIPPSPRGTPQIEVTFEVDANGILNVKAEDKGTGKSEKITITNDKGRLSQEEIDRMVREAEEFAEEDKKVKERIDARNGLETYVYNMKNQISDKDKLADKLESDEKEKIETAVKDALEWLDDNQSAEKEDYEEKLKEVEAVCNPIITSVYQRSGGAPGGGESAEDDESHDEL 666
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 4740164 4743514 - evm.model.ptg000001l.656 HCH5g0656 544808
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0656 666 SUPERFAMILY Heat shock protein 70kD (HSP70), C-terminal subdomain 569 652 IPR029048 -
HCH5g0656 666 Coils Coil 285 305 - -
HCH5g0656 666 SUPERFAMILY Actin-like ATPase domain 223 414 IPR043129 -
HCH5g0656 666 SUPERFAMILY Actin-like ATPase domain 36 220 IPR043129 -
HCH5g0656 666 CDD HSPA5-like_NBD 36 410 IPR042050 -
HCH5g0656 666 Coils Coil 615 635 - -
HCH5g0656 666 Gene3D - 39 410 - -
HCH5g0656 666 FunFam Heat shock 70 kDa 417 571 - -
HCH5g0656 666 FunFam Heat shock protein 70 39 226 - -
HCH5g0656 666 FunFam Luminal-binding protein 5 571 646 - -
HCH5g0656 666 MobiDBLite consensus disorder prediction 643 666 - -
HCH5g0656 666 Gene3D Substrate Binding Domain Of DNAk; Chain A, domain 1 417 571 IPR029047 -
HCH5g0656 666 Coils Coil 581 601 - -
HCH5g0656 666 FunFam Endoplasmic reticulum chaperone BiP 261 344 - -
HCH5g0656 666 Gene3D - 221 395 - -
HCH5g0656 666 PANTHER HSC70CB, ISOFORM G-RELATED 36 647 IPR050451 GO:0005634(PANTHER)|GO:0005829(PANTHER)|GO:0006457(PANTHER)
HCH5g0656 666 ProSitePatterns Heat shock hsp70 proteins family signature 3. 366 380 IPR018181 -
HCH5g0656 666 Coils Coil 547 567 - -
HCH5g0656 666 Pfam Hsp70 protein 38 645 IPR013126 GO:0005524(InterPro)|GO:0140662(InterPro)
HCH5g0656 666 ProSitePatterns Heat shock hsp70 proteins family signature 1. 41 48 IPR018181 -
HCH5g0656 666 FunFam Chaperone protein HscA homolog 227 275 - -
HCH5g0656 666 Gene3D - 572 646 IPR029048 -
HCH5g0656 666 FunFam heat shock 70 kDa protein-like 100 155 - -
HCH5g0656 666 SUPERFAMILY Heat shock protein 70kD (HSP70), peptide-binding domain 419 575 IPR029047 -
HCH5g0656 666 ProSitePatterns Heat shock hsp70 proteins family signature 2. 229 242 IPR018181 -
HCH5g0656 666 Gene3D Actin; Chain A, domain 4 261 344 - -
HCH5g0656 666 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 21 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 37 50 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 87 95 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 175 195 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 363 379 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 395 415 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 235 245 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 422 441 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 65 77 - -
HCH5g0656 666 PRINTS 70kDa heat shock protein signature 503 519 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH4g1711 HCH-Chr4:20792503 HCH5g0656 HCH-Chr5:4740164 1.60E-151 dispersed
HCH5g0656 HCH-Chr5:4740164 HCH6g1173 HCH-Chr6:46205040 0.00E+00 dispersed
HCH5g0656 HCH-Chr5:4740164 HCH13g0471 HCH-Chr13:3261085 4.70E-230 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0656 K09490 - csv:101207505 1220.3