Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH5g0741 | ATGTCCGAACCTCCATCTTCATCCTCATCCCACGACAACAATAATGATCCTTCCACGCCACCTCAGCAATCTCCTTCCTCCGTTACCAAGCTCCGTAAAATCCCCCAAATTCCAATTCTCCGCGCCACCAGATCTAACCCCACTGATTCCGATCACGATACCGATAGCGAACACGACAATGACGACACGGTTATCGACGACACGGACGGTCACGATCACGATCACGATCACAATGATCATGATTCCGGCGATTCGTCTATTATTATGGCGTCCTCTCTTGGATTAAACCACATTAGGACACGCTCTTCTCCTCTGCCTCTTCGACCTTCCGCTGTCGGTACACCGTCCAATTTGGGGAGTACTTCCAATTCCAATCATGATCATAATGTTCATGCTGCCCCTGCCCCGCCGAAAGTTTCCGCTACTGATCTAGGTAAAAAAGTTCCATTGAGTATATCGAAATCTTTTAGACACCCTTCAGCATTGAATCATAGTTTTGAGTGTAATAATGCAGCATTTGCAAGGGAAATTCAGTCTCCACGGTTTCGTGCGATACTGCGTCTTACGAGTGGAAGAAAGAAGAGAACCCCAGATATCAAAAGCTTCTCTCATGAGCTCAATTCCAAAGCAGTTCGGCCTTTTTGGAAGCCTCGGGCATGTGGACATTCGGAAGAGATCATGGTGGCTATTAGAGCAAAATTTGACACACTGAAGGAAGATGTTAATTCTGAATTGGGTGTATTTGCTGGAGACCTGGTGGATATACTTGAAAAGGCACAAGAGACTCATTCTGAACGTAAAGAGGGCTTGGAGGATTTATTGGTGACTGCTCGGCAATGTGCGAAAATGTCACCAACTGAATTTTGGGAGAAAGGTGAAGCTATTGTTCAAAATCTAGATGATCGGCGCCAGGAGCTGTCATTGGGAATTCTTAAGAAAGCCCACACCCGCCTTCTTTTCATCTTAACGCGATGCACTCGGCTTATTCAGTTTAGAAAAGAGGGTGGCTATGAAGATGAACACATTTTGGGTCTTCACCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATTAGGCAGGCTGAACATCATGACTTCAGCGGTCCATTGACTGGGAAAGAAGATGTTGAGAAGCAGATAAAGTTAATTGGGAAGGATCAAATCATTGTGAAACAAGATTTAGATCTAAATTTTAGCAGCACTGCTGGATGTGTAGATGTGGACACTGCCCTAAGTATCGATTCGACTACGAGCATCTATAGGATGTCTTCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAATAGAAAAGACTCTGACTCTATTGTTGATACACCTTCCCAGGATAAACTAGAATTGTTGCATGTAGAAGAAGCAAAAACTGGCAGTGATGACCATTCAGATATTCCATGCAGTCATCTTGAGCATTCAGAAGCACCAACAAGAGAACAAAAGGTATCTTGGGGATTATGGGGTTATAATCAAAATGGCAATTATGAGAATTTAATGATTTGTCGGATTTGTGAGGTTGAAATTCCAACTATTCATGTTGAGGAGCATTCTCGAATATGTACAATAGCTGATAGGTGTGATTTGAAAGGTTTATCTCTGAATGAGCGACTTGAACGGGTTGCTGAAGCTCTTGAAAAGATACTGGAGTCTTGGACACCAAAAAGTACTCCTAGAAGTAGTGAGACTTGCTGTGGAAATTTTGATACTGCTAAAGTTTCTACATCAAGTGTACAAGAAGAAATTTATGAGCATTCATCTAAAGGAATCAATTTGTCATGTCTAAACTCTGAAGATCTTCTTGATTCCCTTCCTGATACTGTTAACACTTCCTTCATGGATGGGCAGGATATTTTTCCCGACACATCGTACAATCGACATTTTGTTTTCACACCAGATCAGAGTACTAAATCACTGTCAGCTGGAAGTCTAACACCCAGATCACCTCTTTTAACACCCAGATCAAGCCAGATTGAATTGTTACTGCATGGGCGCAGAGGAATATATGAACTTGAAAATTATCAGCAGATAGGCAAACTGTTGGATATTGTTCGTTCCATTGCAAATGTTAACAACTCCGACTATGTTGCATTGGATTATATGCATGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCACTTGTTGTAGAGACTTTTGGAAGGCGCATAGAGAAGCTTTTGCAGGAAAAATATGTACACATTTGTGGGCAGATCGAGGATGATAAGGTAGACTCTTCAAATGGCGTGGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTTCGTAGTCTGCGTGCAAGTCCTGTTAACACGTGTTCAAAAGATCGAACGTCTATTGAAGACTTTGAAATAATTAAACCAATTAGCAGAGGGGCATATGGACGAGTTTTCCTTGCCAGAAAAAGAGCAACTGGGGACTTATTTGCAATAAAGGTTCTAAAGAAGGCCGATATGATTCGTAAGAATGCAGTTGAAAGTATTCTGGCTGAACGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTTGTCATGGAATACTTGAATGGTGGAGATATTTACTCCTTGATGAGAAACTTAGGGTGCTTAGATGAAGATATGGCTCGTATTTATATTGCTGAAATTGTTCTTGCTTTGGAGTATTTGCATTCTTTGAATGTCATTCATAGGGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGACTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCGATCAGTGGAACTGCTTCACTTGGAGATGAAGGACCGAAATCACAATTTTTGCCGAAAAGAGAACATAGGCAAAAGCAACCAGTTGTTGGTACTCCTGATTATTTGGCCCCAGAGATACTTCTTGGCATGGGACATGGTATGACTGCAGATTGGTGGTCTGTTGGAGTTATTGTTTTTGAGATGCTTGTAGGAATTCCACCATTCAATGCAGAAAGTCCACAGCAAATTTTTAATAATATAATAAATAGAGACATACCGTGGCCCAAGGTACCTGAAGAGATGAGTTATGAAGCCCATGATTTGATCGACAAGTTGCTGACTGAAAATTCAGTTCAAAGACTAGGAGCTACAGGTGCTGGAGAGGTGAAGCAGCACCCTTTCTTCAAAGATATTAACTGGGAAACACTTGCTAGACAGAAGGCAATGTTTATTCCATCAGCAGAGCCGCAAGATACAAGTTATTTCATGAGCCGTTACATATGGAATCCAGAAGATGGGGATTTTAATGGTGGAAGTGACTTTGATGATCATTATTTGACTGACAGTTGCAGCAGTAGTTCATATAGCAACATGCTAGATGAAGATGGGGATGAATGTGGTAGTTTGACTGATTTCGGTGCTCCAGCCCTTTCTGTGAAGTACTCATTCAGCAATTTCTCTTTTAAGAACTTGTCACAATTGGCTTCAATCAATTATGATTTGGTTGTGAAGAGCAGTCAAAATTCACCAGACGTATCGAAACCGCCCGTTCCTTGA | 3609 | 41.42 | MSEPPSSSSSHDNNNDPSTPPQQSPSSVTKLRKIPQIPILRATRSNPTDSDHDTDSEHDNDDTVIDDTDGHDHDHDHNDHDSGDSSIIMASSLGLNHIRTRSSPLPLRPSAVGTPSNLGSTSNSNHDHNVHAAPAPPKVSATDLGKKVPLSISKSFRHPSALNHSFECNNAAFAREIQSPRFRAILRLTSGRKKRTPDIKSFSHELNSKAVRPFWKPRACGHSEEIMVAIRAKFDTLKEDVNSELGVFAGDLVDILEKAQETHSERKEGLEDLLVTARQCAKMSPTEFWEKGEAIVQNLDDRRQELSLGILKKAHTRLLFILTRCTRLIQFRKEGGYEDEHILGLHQLSDLGIYPEKIRQAEHHDFSGPLTGKEDVEKQIKLIGKDQIIVKQDLDLNFSSTAGCVDVDTALSIDSTTSIYRMSSWKKLPSAAEKNRKDSDSIVDTPSQDKLELLHVEEAKTGSDDHSDIPCSHLEHSEAPTREQKVSWGLWGYNQNGNYENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLSLNERLERVAEALEKILESWTPKSTPRSSETCCGNFDTAKVSTSSVQEEIYEHSSKGINLSCLNSEDLLDSLPDTVNTSFMDGQDIFPDTSYNRHFVFTPDQSTKSLSAGSLTPRSPLLTPRSSQIELLLHGRRGIYELENYQQIGKLLDIVRSIANVNNSDYVALDYMHDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHICGQIEDDKVDSSNGVVDEESSVEDDTVRSLRASPVNTCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLMRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGTASLGDEGPKSQFLPKREHRQKQPVVGTPDYLAPEILLGMGHGMTADWWSVGVIVFEMLVGIPPFNAESPQQIFNNIINRDIPWPKVPEEMSYEAHDLIDKLLTENSVQRLGATGAGEVKQHPFFKDINWETLARQKAMFIPSAEPQDTSYFMSRYIWNPEDGDFNGGSDFDDHYLTDSCSSSSYSNMLDEDGDECGSLTDFGAPALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPPVP | 1202 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
5 | 5399767 | 5410972 | - | evm.model.ptg000001l.741 | HCH5g0741 | 544893 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH5g0741 | 1202 | MobiDBLite | consensus disorder prediction | 1 | 87 | - | - | |
HCH5g0741 | 1202 | ProSiteProfiles | AGC-kinase C-terminal domain profile. | 1080 | 1182 | IPR000961 | GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH5g0741 | 1202 | PANTHER | SERINE/THREONINE-PROTEIN KINASE | 495 | 1174 | IPR050236 | GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER) | |
HCH5g0741 | 1202 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 910 | 922 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
HCH5g0741 | 1202 | Gene3D | Phosphorylase Kinase; domain 1 | 789 | 1106 | - | - | |
HCH5g0741 | 1202 | SMART | serkin_6 | 791 | 1079 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH5g0741 | 1202 | MobiDBLite | consensus disorder prediction | 952 | 979 | - | - | |
HCH5g0741 | 1202 | CDD | STKc_MAST_like | 797 | 1084 | - | - | |
HCH5g0741 | 1202 | MobiDBLite | consensus disorder prediction | 99 | 143 | - | - | |
HCH5g0741 | 1202 | MobiDBLite | consensus disorder prediction | 46 | 83 | - | - | |
HCH5g0741 | 1202 | ProSiteProfiles | Protein kinase domain profile. | 791 | 1079 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
HCH5g0741 | 1202 | MobiDBLite | consensus disorder prediction | 107 | 129 | - | - | |
HCH5g0741 | 1202 | Gene3D | Transferase(Phosphotransferase) domain 1 | 875 | 1097 | - | - | |
HCH5g0741 | 1202 | MobiDBLite | consensus disorder prediction | 1 | 31 | - | - | |
HCH5g0741 | 1202 | FunFam | probable serine/threonine protein kinase IREH1 | 789 | 879 | - | - | |
HCH5g0741 | 1202 | SUPERFAMILY | Protein kinase-like (PK-like) | 788 | 1111 | IPR011009 | - | |
HCH5g0741 | 1202 | Pfam | Protein kinase domain | 792 | 1079 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH3g0004 | HCH-Chr3:57801 | HCH5g0741 | HCH-Chr5:5399767 | 0.00E+00 | dispersed | |
HCH5g0741 | HCH-Chr5:5399767 | HCH6g1494 | HCH-Chr6:48512087 | 8.10E-71 | dispersed | |
HCH5g0741 | HCH-Chr5:5399767 | HCH12g0486 | HCH-Chr12:2843049 | 7.10E-67 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
81513 | PF00069 | Pkinase | 7.20E-63 | CL0016 | HCH | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH5g0741 | K08789 | - | csv:101210442 | 1811.19 |