Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0741 ATGTCCGAACCTCCATCTTCATCCTCATCCCACGACAACAATAATGATCCTTCCACGCCACCTCAGCAATCTCCTTCCTCCGTTACCAAGCTCCGTAAAATCCCCCAAATTCCAATTCTCCGCGCCACCAGATCTAACCCCACTGATTCCGATCACGATACCGATAGCGAACACGACAATGACGACACGGTTATCGACGACACGGACGGTCACGATCACGATCACGATCACAATGATCATGATTCCGGCGATTCGTCTATTATTATGGCGTCCTCTCTTGGATTAAACCACATTAGGACACGCTCTTCTCCTCTGCCTCTTCGACCTTCCGCTGTCGGTACACCGTCCAATTTGGGGAGTACTTCCAATTCCAATCATGATCATAATGTTCATGCTGCCCCTGCCCCGCCGAAAGTTTCCGCTACTGATCTAGGTAAAAAAGTTCCATTGAGTATATCGAAATCTTTTAGACACCCTTCAGCATTGAATCATAGTTTTGAGTGTAATAATGCAGCATTTGCAAGGGAAATTCAGTCTCCACGGTTTCGTGCGATACTGCGTCTTACGAGTGGAAGAAAGAAGAGAACCCCAGATATCAAAAGCTTCTCTCATGAGCTCAATTCCAAAGCAGTTCGGCCTTTTTGGAAGCCTCGGGCATGTGGACATTCGGAAGAGATCATGGTGGCTATTAGAGCAAAATTTGACACACTGAAGGAAGATGTTAATTCTGAATTGGGTGTATTTGCTGGAGACCTGGTGGATATACTTGAAAAGGCACAAGAGACTCATTCTGAACGTAAAGAGGGCTTGGAGGATTTATTGGTGACTGCTCGGCAATGTGCGAAAATGTCACCAACTGAATTTTGGGAGAAAGGTGAAGCTATTGTTCAAAATCTAGATGATCGGCGCCAGGAGCTGTCATTGGGAATTCTTAAGAAAGCCCACACCCGCCTTCTTTTCATCTTAACGCGATGCACTCGGCTTATTCAGTTTAGAAAAGAGGGTGGCTATGAAGATGAACACATTTTGGGTCTTCACCAACTTAGTGATCTAGGAATTTATCCAGAGAAAATTAGGCAGGCTGAACATCATGACTTCAGCGGTCCATTGACTGGGAAAGAAGATGTTGAGAAGCAGATAAAGTTAATTGGGAAGGATCAAATCATTGTGAAACAAGATTTAGATCTAAATTTTAGCAGCACTGCTGGATGTGTAGATGTGGACACTGCCCTAAGTATCGATTCGACTACGAGCATCTATAGGATGTCTTCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAATAGAAAAGACTCTGACTCTATTGTTGATACACCTTCCCAGGATAAACTAGAATTGTTGCATGTAGAAGAAGCAAAAACTGGCAGTGATGACCATTCAGATATTCCATGCAGTCATCTTGAGCATTCAGAAGCACCAACAAGAGAACAAAAGGTATCTTGGGGATTATGGGGTTATAATCAAAATGGCAATTATGAGAATTTAATGATTTGTCGGATTTGTGAGGTTGAAATTCCAACTATTCATGTTGAGGAGCATTCTCGAATATGTACAATAGCTGATAGGTGTGATTTGAAAGGTTTATCTCTGAATGAGCGACTTGAACGGGTTGCTGAAGCTCTTGAAAAGATACTGGAGTCTTGGACACCAAAAAGTACTCCTAGAAGTAGTGAGACTTGCTGTGGAAATTTTGATACTGCTAAAGTTTCTACATCAAGTGTACAAGAAGAAATTTATGAGCATTCATCTAAAGGAATCAATTTGTCATGTCTAAACTCTGAAGATCTTCTTGATTCCCTTCCTGATACTGTTAACACTTCCTTCATGGATGGGCAGGATATTTTTCCCGACACATCGTACAATCGACATTTTGTTTTCACACCAGATCAGAGTACTAAATCACTGTCAGCTGGAAGTCTAACACCCAGATCACCTCTTTTAACACCCAGATCAAGCCAGATTGAATTGTTACTGCATGGGCGCAGAGGAATATATGAACTTGAAAATTATCAGCAGATAGGCAAACTGTTGGATATTGTTCGTTCCATTGCAAATGTTAACAACTCCGACTATGTTGCATTGGATTATATGCATGATCGATTAGAAGACCTTAAATATGCAATCCAGGATAGGAAGGTGGATGCACTTGTTGTAGAGACTTTTGGAAGGCGCATAGAGAAGCTTTTGCAGGAAAAATATGTACACATTTGTGGGCAGATCGAGGATGATAAGGTAGACTCTTCAAATGGCGTGGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTTCGTAGTCTGCGTGCAAGTCCTGTTAACACGTGTTCAAAAGATCGAACGTCTATTGAAGACTTTGAAATAATTAAACCAATTAGCAGAGGGGCATATGGACGAGTTTTCCTTGCCAGAAAAAGAGCAACTGGGGACTTATTTGCAATAAAGGTTCTAAAGAAGGCCGATATGATTCGTAAGAATGCAGTTGAAAGTATTCTGGCTGAACGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTTGTCATGGAATACTTGAATGGTGGAGATATTTACTCCTTGATGAGAAACTTAGGGTGCTTAGATGAAGATATGGCTCGTATTTATATTGCTGAAATTGTTCTTGCTTTGGAGTATTTGCATTCTTTGAATGTCATTCATAGGGACTTAAAGCCAGATAACTTATTGATTGGTCAAGATGGTCACATTAAGTTGACAGACTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCGATCAGTGGAACTGCTTCACTTGGAGATGAAGGACCGAAATCACAATTTTTGCCGAAAAGAGAACATAGGCAAAAGCAACCAGTTGTTGGTACTCCTGATTATTTGGCCCCAGAGATACTTCTTGGCATGGGACATGGTATGACTGCAGATTGGTGGTCTGTTGGAGTTATTGTTTTTGAGATGCTTGTAGGAATTCCACCATTCAATGCAGAAAGTCCACAGCAAATTTTTAATAATATAATAAATAGAGACATACCGTGGCCCAAGGTACCTGAAGAGATGAGTTATGAAGCCCATGATTTGATCGACAAGTTGCTGACTGAAAATTCAGTTCAAAGACTAGGAGCTACAGGTGCTGGAGAGGTGAAGCAGCACCCTTTCTTCAAAGATATTAACTGGGAAACACTTGCTAGACAGAAGGCAATGTTTATTCCATCAGCAGAGCCGCAAGATACAAGTTATTTCATGAGCCGTTACATATGGAATCCAGAAGATGGGGATTTTAATGGTGGAAGTGACTTTGATGATCATTATTTGACTGACAGTTGCAGCAGTAGTTCATATAGCAACATGCTAGATGAAGATGGGGATGAATGTGGTAGTTTGACTGATTTCGGTGCTCCAGCCCTTTCTGTGAAGTACTCATTCAGCAATTTCTCTTTTAAGAACTTGTCACAATTGGCTTCAATCAATTATGATTTGGTTGTGAAGAGCAGTCAAAATTCACCAGACGTATCGAAACCGCCCGTTCCTTGA 3609 41.42 MSEPPSSSSSHDNNNDPSTPPQQSPSSVTKLRKIPQIPILRATRSNPTDSDHDTDSEHDNDDTVIDDTDGHDHDHDHNDHDSGDSSIIMASSLGLNHIRTRSSPLPLRPSAVGTPSNLGSTSNSNHDHNVHAAPAPPKVSATDLGKKVPLSISKSFRHPSALNHSFECNNAAFAREIQSPRFRAILRLTSGRKKRTPDIKSFSHELNSKAVRPFWKPRACGHSEEIMVAIRAKFDTLKEDVNSELGVFAGDLVDILEKAQETHSERKEGLEDLLVTARQCAKMSPTEFWEKGEAIVQNLDDRRQELSLGILKKAHTRLLFILTRCTRLIQFRKEGGYEDEHILGLHQLSDLGIYPEKIRQAEHHDFSGPLTGKEDVEKQIKLIGKDQIIVKQDLDLNFSSTAGCVDVDTALSIDSTTSIYRMSSWKKLPSAAEKNRKDSDSIVDTPSQDKLELLHVEEAKTGSDDHSDIPCSHLEHSEAPTREQKVSWGLWGYNQNGNYENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLSLNERLERVAEALEKILESWTPKSTPRSSETCCGNFDTAKVSTSSVQEEIYEHSSKGINLSCLNSEDLLDSLPDTVNTSFMDGQDIFPDTSYNRHFVFTPDQSTKSLSAGSLTPRSPLLTPRSSQIELLLHGRRGIYELENYQQIGKLLDIVRSIANVNNSDYVALDYMHDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHICGQIEDDKVDSSNGVVDEESSVEDDTVRSLRASPVNTCSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLMRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGTASLGDEGPKSQFLPKREHRQKQPVVGTPDYLAPEILLGMGHGMTADWWSVGVIVFEMLVGIPPFNAESPQQIFNNIINRDIPWPKVPEEMSYEAHDLIDKLLTENSVQRLGATGAGEVKQHPFFKDINWETLARQKAMFIPSAEPQDTSYFMSRYIWNPEDGDFNGGSDFDDHYLTDSCSSSSYSNMLDEDGDECGSLTDFGAPALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPPVP 1202
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
5 5399767 5410972 - evm.model.ptg000001l.741 HCH5g0741 544893
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0741 1202 MobiDBLite consensus disorder prediction 1 87 - -
HCH5g0741 1202 ProSiteProfiles AGC-kinase C-terminal domain profile. 1080 1182 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH5g0741 1202 PANTHER SERINE/THREONINE-PROTEIN KINASE 495 1174 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
HCH5g0741 1202 ProSitePatterns Serine/Threonine protein kinases active-site signature. 910 922 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
HCH5g0741 1202 Gene3D Phosphorylase Kinase; domain 1 789 1106 - -
HCH5g0741 1202 SMART serkin_6 791 1079 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH5g0741 1202 MobiDBLite consensus disorder prediction 952 979 - -
HCH5g0741 1202 CDD STKc_MAST_like 797 1084 - -
HCH5g0741 1202 MobiDBLite consensus disorder prediction 99 143 - -
HCH5g0741 1202 MobiDBLite consensus disorder prediction 46 83 - -
HCH5g0741 1202 ProSiteProfiles Protein kinase domain profile. 791 1079 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
HCH5g0741 1202 MobiDBLite consensus disorder prediction 107 129 - -
HCH5g0741 1202 Gene3D Transferase(Phosphotransferase) domain 1 875 1097 - -
HCH5g0741 1202 MobiDBLite consensus disorder prediction 1 31 - -
HCH5g0741 1202 FunFam probable serine/threonine protein kinase IREH1 789 879 - -
HCH5g0741 1202 SUPERFAMILY Protein kinase-like (PK-like) 788 1111 IPR011009 -
HCH5g0741 1202 Pfam Protein kinase domain 792 1079 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH3g0004 HCH-Chr3:57801 HCH5g0741 HCH-Chr5:5399767 0.00E+00 dispersed
HCH5g0741 HCH-Chr5:5399767 HCH6g1494 HCH-Chr6:48512087 8.10E-71 dispersed
HCH5g0741 HCH-Chr5:5399767 HCH12g0486 HCH-Chr12:2843049 7.10E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
81513 PF00069 Pkinase 7.20E-63 CL0016 HCH PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0741 K08789 - csv:101210442 1811.19