Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH5g0799 | ATGGCGTTGGGAACGAAAGCATTTCCATTAACAGTAGTGAGTCACGTGCTTGGGATCGTAGCTGTGATTCTGGTTTTGTTTTGGAATATACACTTTAGAGGTGGTTTAGCTTGGGAAGCTAAGGACAAGAATCTCATCTTCAACATCCATCCCGTTCTTATGCTACTCGGCCTGGTGGTCATTGGTGGTGAAGCAATAATTAGCTATAAAGCACTGCCGTTGAGGAAAGAAGTGAAGAAGATAATACATTTGGTGCTGCATGCAATTGGATTGATATTGGGAATTGTGGGGATTAGTGCTGCTTTCAAAAACCATAATGAGAGTGGAATTCCCAATCTTTACAGCTTGCATTCTTGGATTGGTATTGGTGTTACTGCCCTCTATGGCATTCAGTGGCTCTACGGCTTACTGACATTTTTCTACCCTGGAGGATCCCTAGATCTCAAAAGGGCTTCACTTCCATGGCACGTAGTATTTGGTCTATTAGTTTACATAGTAGTCGTAGGCAATTCTGCCCTTGGTTTCCTGGAGAAGCTTACATTCCTGGAGAGCGGCGGCGTCGCCAGATATGGCGCCGAGGCTTTCCTCGTTAACTTCACCGCCATCACCACCATTTTGTTTGCAATCTTTGTGATATTATCAGTTATTTCAAAGCCTGCATCTGCATCTGCAGAAGAAGACCATGTCTATTCTGCTATAGGGTGA | 705 | 44.11 | MALGTKAFPLTVVSHVLGIVAVILVLFWNIHFRGGLAWEAKDKNLIFNIHPVLMLLGLVVIGGEAIISYKALPLRKEVKKIIHLVLHAIGLILGIVGISAAFKNHNESGIPNLYSLHSWIGIGVTALYGIQWLYGLLTFFYPGGSLDLKRASLPWHVVFGLLVYIVVVGNSALGFLEKLTFLESGGVARYGAEAFLVNFTAITTILFAIFVILSVISKPASASAEEDHVYSAIG | 234 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 6129590 | 6135429 | - | evm.model.ptg000001l.799 | HCH5g0799 | 544951 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH5g0799 | 234 | FunFam | Cytochrome b reductase 1 | 4 | 225 | - | - | |
| HCH5g0799 | 234 | ProSiteProfiles | Cytochrome b561 domain profile. | 13 | 216 | IPR006593 | - | |
| HCH5g0799 | 234 | SMART | 561_7 | 49 | 175 | IPR006593 | - | |
| HCH5g0799 | 234 | PANTHER | CYTOCHROME B561-RELATED | 6 | 222 | IPR043205 | GO:0016491(PANTHER)|GO:0016491(InterPro) | |
| HCH5g0799 | 234 | CDD | Cyt_b561_ACYB-1_like | 42 | 183 | - | - | |
| HCH5g0799 | 234 | Gene3D | - | 3 | 224 | - | - | |
| HCH5g0799 | 234 | Pfam | Eukaryotic cytochrome b561 | 49 | 181 | IPR006593 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH13g0619 | HCH-Chr13:4792997 | HCH5g0799 | HCH-Chr5:6129590 | 2.00E-50 | dispersed | |
| HCH1g0068 | HCH-Chr1:5767938 | HCH5g0799 | HCH-Chr5:6129590 | 8.50E-43 | dispersed | |
| HCH1g0812 | HCH-Chr1:56790553 | HCH5g0799 | HCH-Chr5:6129590 | 3.60E-26 | dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH5g0799 | K08360 | - | csv:101209308 | 368.622 |