Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH5g0810 | ATGTCGTTTCTTGATGAAGGAATCTGCTGCTTTGCGATAAAGGCTTTGGTTACTTGGCTGTTATTGAAGGTATCGTTTTGTTGGTGGATTTCACCATTTTTGGTTTATTGGAGACTGAAGAGAAATGGATTTGGTGGTCCAACGCCAAGTTTTCCTTTGGGAAATATCAATGATATGAAAAAGAAGAACAAATCTTCTCCATTTGGATCTTTACAACTAACCCATAACATACATTCCATCGTTTTTCCCTATTTCGCTCGCTGGCAAAAAGCTTACGGAAAAGTGTTCACATATTGGCTTGGAACAGAACCATTTTTGTACGTAGCAGACCCAGAATTCTTGAAGATATTGTCAGGAGAAGTAAAGGCAAAGAACTGGGGAAAGCCATCAGTTTTCAGACAAGACAGGGAATCAATGTTTGGAAATGGTCTTGTAATGGCTGAAGGCGACGAGTGGGTTCGTCAAAGACATGTTATTACTCCTGCATTTAATCCATCCAACTTGAAGGCCATGGCAAGCTTGATGGTAGAGTCCACCACCCAAATGCTAGAAAAATGGGCACACCTCATAAACTCCGGCCACCGAGAAATCGACGTCGAGAGCGAAATCACAGCCACCGCCGGCGAGATCATCGCCAAGACAAGCTTTGGAATCGATCACCAAAGTGGAAGACAAGTATTTGGAAAGCTAAGAGATCTTCAAATGACCCTTTTCAAAACCAACCGTTTAGTAGGAGTTCCATTCAGCAAATATTTAAACCCTAGAAAAACCCTAGAAGCCAAAAAGCTTGGGAAAGAAATAGACAATCTCTTCCTCTCGGTCATAACGGGCAGAAGGAAAGCAAATTCAGGGCAGAATCAAACAGATCTTCTTAGTTTGTTGCTTAAAGAGAATAATAATAACAATAACGAAGAGGGCAAATTGGGAAGAACATTGACAACGACAGAGTTAGTAGATGAATGTAAAACATTTTTCTTTGGTGGTCATGAGACGACAGCTTTGGCAGTGACGTGGACTTTGCTTCTTTTGGCTATTCATAGAGAGTGGCAAAACCAACTGAGAGAAGAAATCAGACAAGTTCTTGGAGATAAAGAGAGTGAATTTGATTTCACAAGGCTTGCTGGACTAAAGAAGATGGGATGGGTTATGAGTGAGGTTCTTCGGCTATACCCATCAGCACCAAATGTACAAAGGCAAGCAAGAAGAGACATTGAAATAAACGGCCTCAAAATCCCTAATGGGACCAACATGTGGATCGATGTCGTAGCCATGCATCACGACGAGGCTCTATGGGGCGACGACGTGAACGAGTTCCGGCCCGAGAGGTTCGAAAACGATACTATCTCCGGTGGCTGCCCCCACAAGATGGGGTACATGCCATTTGGGTTTGGAGGAAGAATGTGTGTGGGAAGGAACTTGACATTTATGGAGTATAAAATTGTGCTGACCCTAATTTTGTGCAGATTTTCATTTACTCTCTCTCCTTCATATTGCCATTCTCCTTCCATTTTGCTCTCTCTTAGGCCAGGCCATGGCCTGCCCCTCATATTTCGCTTGCTAGAGAAAGCCTAA | 1572 | 42.88 | MSFLDEGICCFAIKALVTWLLLKVSFCWWISPFLVYWRLKRNGFGGPTPSFPLGNINDMKKKNKSSPFGSLQLTHNIHSIVFPYFARWQKAYGKVFTYWLGTEPFLYVADPEFLKILSGEVKAKNWGKPSVFRQDRESMFGNGLVMAEGDEWVRQRHVITPAFNPSNLKAMASLMVESTTQMLEKWAHLINSGHREIDVESEITATAGEIIAKTSFGIDHQSGRQVFGKLRDLQMTLFKTNRLVGVPFSKYLNPRKTLEAKKLGKEIDNLFLSVITGRRKANSGQNQTDLLSLLLKENNNNNNEEGKLGRTLTTTELVDECKTFFFGGHETTALAVTWTLLLLAIHREWQNQLREEIRQVLGDKESEFDFTRLAGLKKMGWVMSEVLRLYPSAPNVQRQARRDIEINGLKIPNGTNMWIDVVAMHHDEALWGDDVNEFRPERFENDTISGGCPHKMGYMPFGFGGRMCVGRNLTFMEYKIVLTLILCRFSFTLSPSYCHSPSILLSLRPGHGLPLIFRLLEKA | 523 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 5 | 6340829 | 6344429 | + | evm.model.ptg000001l.810 | HCH5g0810 | 544962 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH5g0810 | 523 | PRINTS | E-class P450 group I signature | 316 | 333 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | E-class P450 group I signature | 336 | 362 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | E-class P450 group I signature | 468 | 491 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | E-class P450 group I signature | 458 | 468 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | E-class P450 group I signature | 89 | 108 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | Pfam | Cytochrome P450 | 69 | 495 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | Gene3D | Cytochrome P450 | 33 | 520 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | P450 superfamily signature | 327 | 344 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | P450 superfamily signature | 381 | 392 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | P450 superfamily signature | 459 | 468 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PRINTS | P450 superfamily signature | 468 | 479 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | SUPERFAMILY | Cytochrome P450 | 69 | 518 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH5g0810 | 523 | PANTHER | CYTOCHROME P450 FAMILY MEMBER | 18 | 514 | IPR050665 | GO:0004497(PANTHER) | |
| HCH5g0810 | 523 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 461 | 470 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH5g0810 | HCH-Chr5:6340829 | HCH9g0365 | HCH-Chr9:2261358 | 2.30E-86 | dispersed | |
| HCH11g1227 | HCH-Chr11:44499112 | HCH5g0810 | HCH-Chr5:6340829 | 2.20E-198 | wgd |
Pathway information