Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
HCH5g0810 ATGTCGTTTCTTGATGAAGGAATCTGCTGCTTTGCGATAAAGGCTTTGGTTACTTGGCTGTTATTGAAGGTATCGTTTTGTTGGTGGATTTCACCATTTTTGGTTTATTGGAGACTGAAGAGAAATGGATTTGGTGGTCCAACGCCAAGTTTTCCTTTGGGAAATATCAATGATATGAAAAAGAAGAACAAATCTTCTCCATTTGGATCTTTACAACTAACCCATAACATACATTCCATCGTTTTTCCCTATTTCGCTCGCTGGCAAAAAGCTTACGGAAAAGTGTTCACATATTGGCTTGGAACAGAACCATTTTTGTACGTAGCAGACCCAGAATTCTTGAAGATATTGTCAGGAGAAGTAAAGGCAAAGAACTGGGGAAAGCCATCAGTTTTCAGACAAGACAGGGAATCAATGTTTGGAAATGGTCTTGTAATGGCTGAAGGCGACGAGTGGGTTCGTCAAAGACATGTTATTACTCCTGCATTTAATCCATCCAACTTGAAGGCCATGGCAAGCTTGATGGTAGAGTCCACCACCCAAATGCTAGAAAAATGGGCACACCTCATAAACTCCGGCCACCGAGAAATCGACGTCGAGAGCGAAATCACAGCCACCGCCGGCGAGATCATCGCCAAGACAAGCTTTGGAATCGATCACCAAAGTGGAAGACAAGTATTTGGAAAGCTAAGAGATCTTCAAATGACCCTTTTCAAAACCAACCGTTTAGTAGGAGTTCCATTCAGCAAATATTTAAACCCTAGAAAAACCCTAGAAGCCAAAAAGCTTGGGAAAGAAATAGACAATCTCTTCCTCTCGGTCATAACGGGCAGAAGGAAAGCAAATTCAGGGCAGAATCAAACAGATCTTCTTAGTTTGTTGCTTAAAGAGAATAATAATAACAATAACGAAGAGGGCAAATTGGGAAGAACATTGACAACGACAGAGTTAGTAGATGAATGTAAAACATTTTTCTTTGGTGGTCATGAGACGACAGCTTTGGCAGTGACGTGGACTTTGCTTCTTTTGGCTATTCATAGAGAGTGGCAAAACCAACTGAGAGAAGAAATCAGACAAGTTCTTGGAGATAAAGAGAGTGAATTTGATTTCACAAGGCTTGCTGGACTAAAGAAGATGGGATGGGTTATGAGTGAGGTTCTTCGGCTATACCCATCAGCACCAAATGTACAAAGGCAAGCAAGAAGAGACATTGAAATAAACGGCCTCAAAATCCCTAATGGGACCAACATGTGGATCGATGTCGTAGCCATGCATCACGACGAGGCTCTATGGGGCGACGACGTGAACGAGTTCCGGCCCGAGAGGTTCGAAAACGATACTATCTCCGGTGGCTGCCCCCACAAGATGGGGTACATGCCATTTGGGTTTGGAGGAAGAATGTGTGTGGGAAGGAACTTGACATTTATGGAGTATAAAATTGTGCTGACCCTAATTTTGTGCAGATTTTCATTTACTCTCTCTCCTTCATATTGCCATTCTCCTTCCATTTTGCTCTCTCTTAGGCCAGGCCATGGCCTGCCCCTCATATTTCGCTTGCTAGAGAAAGCCTAA 1572 42.88 MSFLDEGICCFAIKALVTWLLLKVSFCWWISPFLVYWRLKRNGFGGPTPSFPLGNINDMKKKNKSSPFGSLQLTHNIHSIVFPYFARWQKAYGKVFTYWLGTEPFLYVADPEFLKILSGEVKAKNWGKPSVFRQDRESMFGNGLVMAEGDEWVRQRHVITPAFNPSNLKAMASLMVESTTQMLEKWAHLINSGHREIDVESEITATAGEIIAKTSFGIDHQSGRQVFGKLRDLQMTLFKTNRLVGVPFSKYLNPRKTLEAKKLGKEIDNLFLSVITGRRKANSGQNQTDLLSLLLKENNNNNNEEGKLGRTLTTTELVDECKTFFFGGHETTALAVTWTLLLLAIHREWQNQLREEIRQVLGDKESEFDFTRLAGLKKMGWVMSEVLRLYPSAPNVQRQARRDIEINGLKIPNGTNMWIDVVAMHHDEALWGDDVNEFRPERFENDTISGGCPHKMGYMPFGFGGRMCVGRNLTFMEYKIVLTLILCRFSFTLSPSYCHSPSILLSLRPGHGLPLIFRLLEKA 523
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
5 6340829 6344429 + evm.model.ptg000001l.810 HCH5g0810 544962
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
HCH5g0810 523 PRINTS E-class P450 group I signature 316 333 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS E-class P450 group I signature 336 362 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS E-class P450 group I signature 468 491 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS E-class P450 group I signature 458 468 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS E-class P450 group I signature 89 108 IPR002401 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 Pfam Cytochrome P450 69 495 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 Gene3D Cytochrome P450 33 520 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS P450 superfamily signature 327 344 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS P450 superfamily signature 381 392 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS P450 superfamily signature 459 468 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PRINTS P450 superfamily signature 468 479 IPR001128 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 SUPERFAMILY Cytochrome P450 69 518 IPR036396 GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro)
HCH5g0810 523 PANTHER CYTOCHROME P450 FAMILY MEMBER 18 514 IPR050665 GO:0004497(PANTHER)
HCH5g0810 523 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 461 470 IPR017972 GO:0005506(InterPro)|GO:0016705(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH5g0810 HCH-Chr5:6340829 HCH9g0365 HCH-Chr9:2261358 2.30E-86 dispersed
HCH11g1227 HCH-Chr11:44499112 HCH5g0810 HCH-Chr5:6340829 2.20E-198 wgd
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH5g0810 - - - 0.0