Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH6g0062 | ATGGACTCGTCTCTTGAAGCTACGGAATCAGCCGAAGAGTTAATATTGAACTGGGAATCATCATCATCATCATCAGCTGCAGCAGCAGAAGAAACGAAAGAAAAAATGATATTCGATTGTGATCGAGAAGAAATCGAGCGTTACTTAGAAGCAGTAGACGAAATCCAGAAATCTTTATCCAGGGCTTCGTTATCCAATGAACGAAACAAAGCTGAATCAACTCTTCAAATCGCCATGGCTAGATTTGAAGATGAATTCCGTCACATTTTATCGAATCACACAAACCCTATCGAGGTCGATTCTCTTACTGATCCAAGCCCTTCCTCCCGTCGTTCGATTTCCACTTCCTCCAGTGCCGTTTTCGAAGACGAAAATTACGATACTGAATCTGATTTGAATTCTGATTTGAATCTTGATTTGAGTGATAGCTCTAACTCTAGCCCTAGCTTCCGTTCGAGTGTCCGATCGAGCTATCGGACTACGAGCAGTATCCGAGAGCTTGATCTCATGCCGTCCGATGCGATTATCGATCTCCGGTCAATCGCCGAGAGGATGATATCGGCCGGCTACTTACGTGAGTGTATTCAAGTTTACGCTAGTGTTAGGAAGTCGACTTTTGATTCTAGTTTTCGGAGACTTGGAATTGAGAAATTGAGTATTGGTGATATTCAAAGGTTGGATTGGAATGAATTGGAGACTAAGATTAGGAGGTGGATTAGGGCTGCTAAGGTTTCAATTAGGACTTTGTTTTCTAGTGAGAAGAAGCTCTGTGAGCAAATCTTTTATGGTATTGGTACTGCAATTGATGATGCTTGTTTTATGGAGACTGTTAAAGGCCCTGTTACTCAGTTGTTTAATTTCGCTGAGGCAATTAGTATTAGTCGTCGATCGCCCGAGAAGTTATTTAAGATTCTTGATCTTCATGATGCTTTGACTGATTTGATTCCGGATATTGATGTTATATTCGAATCCAAATCGGCTGACTATATTCGAGTTCAGGCTGCAGAGATAGTGTCGAGGTTGGCGGAGGCTGTGAGGGGGACTTTATCGGAGTTTGAGAACGCTGTGCTGCGTGAGCCTTCATTGCTTCCGGTGCCAGGTGGTACACTTCATCCATTGACTAGGTATGTCATGAATTATATAAGCCTCATTTCAGATTATAAAGTGACTTTAGATGAGCTTATTGTGTCGAAACCGTCGACGGGGTCGAGGTATTCGGCTGATTCTACAACCCCGGATATGGACTTTGCTGAATTAGAAGGTAAAACACCATTAGCCCTTCATATGATATGGAGTATAGTGATTCTGCAATTCAATTTGGAAGGGAAGTCTAGGCACTATAGAGATACTTCTTTAGCTCATTTGTTCATCATGAACAATGTTCATTACATTGTTCAGAAGATTAAAGGGTCAACGGAATTGAGAGAAATGATTGGAGATGTTTATCTGAAAAGGTTAACTGGGAAGTTTCGACAGGCTGCCACGAGCTACGAGAGAGCGACTTGGATGAATGTGTTGTATTGTCTGAGAGATGAGGGGTTACATGTGAGTGGGAGCTTCTCTTCCGGCATCTCAAAGAGTGCTGTTAGAGACAGATTCAAGTCTTTCAATGCCATGTTTGAGGAAGTTCATAGGACACAATCCACATGGTTGATACCAGATTCTCAACTCAGGGAGGAGCTTCGCATATCTATAACCGAAAAGTTGATACCAGCTTACAGGTCGTTTATTGGCCGCCATGGGCACCTCATAGAGAGTGGAAGGCACCCAGAAAACTACATCAAGTTCACAACTGATGACTTAGAAAATGCCATCTTGGATTTCTTTGAGGGTTCCACAGCTTCTCAGAACATGAGGAGGAAATCTCACTGA | 1872 | 42.52 | MDSSLEATESAEELILNWESSSSSSAAAAEETKEKMIFDCDREEIERYLEAVDEIQKSLSRASLSNERNKAESTLQIAMARFEDEFRHILSNHTNPIEVDSLTDPSPSSRRSISTSSSAVFEDENYDTESDLNSDLNLDLSDSSNSSPSFRSSVRSSYRTTSSIRELDLMPSDAIIDLRSIAERMISAGYLRECIQVYASVRKSTFDSSFRRLGIEKLSIGDIQRLDWNELETKIRRWIRAAKVSIRTLFSSEKKLCEQIFYGIGTAIDDACFMETVKGPVTQLFNFAEAISISRRSPEKLFKILDLHDALTDLIPDIDVIFESKSADYIRVQAAEIVSRLAEAVRGTLSEFENAVLREPSLLPVPGGTLHPLTRYVMNYISLISDYKVTLDELIVSKPSTGSRYSADSTTPDMDFAELEGKTPLALHMIWSIVILQFNLEGKSRHYRDTSLAHLFIMNNVHYIVQKIKGSTELREMIGDVYLKRLTGKFRQAATSYERATWMNVLYCLRDEGLHVSGSFSSGISKSAVRDRFKSFNAMFEEVHRTQSTWLIPDSQLREELRISITEKLIPAYRSFIGRHGHLIESGRHPENYIKFTTDDLENAILDFFEGSTASQNMRRKSH | 623 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 687870 | 689741 | + | evm.model.ptg000003l.1730 | HCH6g0062 | 545556 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH6g0062 | 623 | SUPERFAMILY | Cullin repeat-like | 32 | 610 | IPR016159 | - | |
HCH6g0062 | 623 | Coils | Coil | 61 | 81 | - | - | |
HCH6g0062 | 623 | PANTHER | EXOCYST COMPLEX PROTEIN EXO70 | 8 | 612 | IPR004140 | GO:0000145(PANTHER)|GO:0000145(InterPro)|GO:0006887(InterPro)|GO:0006887(PANTHER) | |
HCH6g0062 | 623 | MobiDBLite | consensus disorder prediction | 96 | 123 | - | - | |
HCH6g0062 | 623 | Pfam | Exo70 exocyst complex subunit C-terminal | 237 | 607 | IPR046364 | GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro) | |
HCH6g0062 | 623 | Gene3D | Exocyst complex component Exo70 | 115 | 619 | - | - | |
HCH6g0062 | 623 | Pfam | Exocyst complex component Exo70 N-terminal | 9 | 91 | - | - | |
HCH6g0062 | 623 | MobiDBLite | consensus disorder prediction | 96 | 153 | - | - | |
HCH6g0062 | 623 | MobiDBLite | consensus disorder prediction | 131 | 153 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH11g0224 | HCH-Chr11:2061486 | HCH6g0062 | HCH-Chr6:687870 | 3.20E-82 | dispersed | |
HCH1g0497 | HCH-Chr1:53786940 | HCH6g0062 | HCH-Chr6:687870 | 4.70E-86 | dispersed | |
HCH2g1121 | HCH-Chr2:53938680 | HCH6g0062 | HCH-Chr6:687870 | 5.70E-84 | dispersed | |
HCH3g1304 | HCH-Chr3:49769931 | HCH6g0062 | HCH-Chr6:687870 | 1.10E-85 | dispersed | |
HCH4g0579 | HCH-Chr4:3833772 | HCH6g0062 | HCH-Chr6:687870 | 1.60E-34 | dispersed | |
HCH5g1180 | HCH-Chr5:40549821 | HCH6g0062 | HCH-Chr6:687870 | 5.40E-93 | dispersed | |
HCH6g0062 | HCH-Chr6:687870 | HCH8g1477 | HCH-Chr8:49150171 | 1.50E-116 | dispersed | |
HCH6g0062 | HCH-Chr6:687870 | HCH3g0443 | HCH-Chr3:2826887 | 8.90E-122 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH6g0062 | K07195 | - | csv:101204229 | 966.837 |