Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g0114 | ATGGATAGTTTGTGGAATTTAGTGCAGCTCATAACAGCTGCAATATCTTTGATATTTTCAACAATCATAATCCTTAACAGATTTAGCAGCAGCTTTAGACCCACAAGATCTTCAAAATCCATCATCACCACCACCACCACCACCACTACTAACCCTTCACTTCCTTTAGGTTCTCTTGGTTTTCCCTTTATTGGTGAAACCCTTCAGTTTGTTTCTTCTGCTTATTCTCATTGCCCGGAAAGCTTTATGAACCGACGTCGTCACCGGTATGGGAAGGTTTTCAAGTCACATTTATTTGGAAGCCCAACAATTGTTTCAACTGATGCTGAAGTTAGTAGATTTATTCTGCAGAGTGATGCAAAGGCTTTTGTCCCATCTTATCCAAAATCCTTGACAGAATTGATGGGAAAATCTTCTATATTGCTGATTAATGGCAATTTGCAAAGGAGAATTCATGGACTTATTGGAGCCTTCTTCAAGTCATCTCATCTGAAAGATCAAGTAACCAAAAACATGCAGAAATATCTCCAAAGGTCCATCTCTAAATGGACTAGCCAAGACCATCATCCTCTATACATTCAAGATGAAACCAAAAATATTGCCTTTGAAGTACTAGTGAAGACATTGATTAGTTTGGATCCTGGTGAAGAAATGGAGTTTCTCAAGAAACAGTTTCAGGAATTCATTGCTGGACTCATGGCTTTCCCAATAAACATCCCAGGAAGTAGACTTTATAGATCATTACAGGCTAAAAGGAGAATGGTTTGGTTTGTAAAAGAAATAATAAAAGCTAGAAGAAGGAAGATTGATAGTTCAAAAACAATTCCCAATGATATTGTGGAAGTTTTACTGAATGATGCAAGCCAACAAGTAACAGATGAATTAATAGCAGAGAATATGATTGATATGATGATTCCAGGAGAAGATTCAGTGCCAATCCTTATGACTTTGGCCATAAAATACCTTTCAGATTGCCCCTCTGCGCTAGAACAATTGAGGGAGGAAAACATGGAGTTGAAAAGACTAAAAACTCAGCTTGGAGAGCCATTGACTTGGAGTGATTACTTATCATCATTGCCATTTACACAAAATGTGATAACAGAAACACTAAGGATGGGAAACATTATAACAGGAGTGATGAGAAAGGCCATGAAAGATATTGAGATAAAAGGGAATTTGATACCAAAGGGGTGGTGTGTTCTTACATATTTTAGGTCAATTCATCTTGATCAAAACCACTATCACTCCCCTCACCAATTCAATCCATGGAGATGGCAAGACAGAGATTTAAATACTACTTTGAATTTCACTCCTTTTGGAGGTGGACAAAGGTTGTGCCCTGGGCTAGACTTGGCTAGACTGGAAGCTTCCATCTTCCTACACCACTTTGTCACCGAATTCAGGTGGGTGGCTGAAGAAGATAGAGTTATCAACTTCCCAACAGTGAGAATGAAGAAGAAAATGCCAATTTGGGTCAAAAGAAGAAGTGACATTCGACCTACTTTCTAA | 1509 | 38.37 | MDSLWNLVQLITAAISLIFSTIIILNRFSSSFRPTRSSKSIITTTTTTTTNPSLPLGSLGFPFIGETLQFVSSAYSHCPESFMNRRRHRYGKVFKSHLFGSPTIVSTDAEVSRFILQSDAKAFVPSYPKSLTELMGKSSILLINGNLQRRIHGLIGAFFKSSHLKDQVTKNMQKYLQRSISKWTSQDHHPLYIQDETKNIAFEVLVKTLISLDPGEEMEFLKKQFQEFIAGLMAFPINIPGSRLYRSLQAKRRMVWFVKEIIKARRRKIDSSKTIPNDIVEVLLNDASQQVTDELIAENMIDMMIPGEDSVPILMTLAIKYLSDCPSALEQLREENMELKRLKTQLGEPLTWSDYLSSLPFTQNVITETLRMGNIITGVMRKAMKDIEIKGNLIPKGWCVLTYFRSIHLDQNHYHSPHQFNPWRWQDRDLNTTLNFTPFGGGQRLCPGLDLARLEASIFLHHFVTEFRWVAEEDRVINFPTVRMKKKMPIWVKRRSDIRPTF | 502 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 1443161 | 1447875 | + | evm.model.ptg000003l.1678 | HCH6g0114 | 545608 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g0114 | 502 | Coils | Coil | 325 | 345 | - | - | |
| HCH6g0114 | 502 | PRINTS | E-class P450 group I signature | 87 | 106 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | PRINTS | E-class P450 group I signature | 446 | 469 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | PRINTS | E-class P450 group I signature | 403 | 427 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | PRINTS | E-class P450 group I signature | 363 | 381 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | PRINTS | E-class P450 group I signature | 436 | 446 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | Gene3D | Cytochrome P450 | 42 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | SUPERFAMILY | Cytochrome P450 | 51 | 495 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | CDD | CYP90-like | 86 | 490 | - | - | |
| HCH6g0114 | 502 | Pfam | Cytochrome P450 | 56 | 475 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
| HCH6g0114 | 502 | FunFam | 3-epi-6-deoxocathasterone 23-monooxygenase CYP90D1 | 44 | 495 | - | - | |
| HCH6g0114 | 502 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 439 | 448 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
| HCH6g0114 | 502 | PANTHER | CYTOCHROME P450 26 | 54 | 471 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER)|GO:0016709(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH14g0598 | HCH-Chr14:34772544 | HCH6g0114 | HCH-Chr6:1443161 | 8.30E-51 | dispersed | |
| HCH14g0614 | HCH-Chr14:34870399 | HCH6g0114 | HCH-Chr6:1443161 | 4.90E-136 | dispersed | |
| HCH1g0373 | HCH-Chr1:51158760 | HCH6g0114 | HCH-Chr6:1443161 | 4.10E-98 | dispersed | |
| HCH6g0114 | HCH-Chr6:1443161 | HCH6g0940 | HCH-Chr6:44195356 | 8.90E-72 | dispersed | |
| HCH4g1474 | HCH-Chr4:11150924 | HCH6g0114 | HCH-Chr6:1443161 | 3.90E-202 | wgd |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| HCH6g0114 | K12638 | - | csv:101212581 | 736.487 |