Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH6g0289 | ATGCCAGCCTTTGATATCTCTACAACTTCCGGCGAAACCGTGTGTGTCACCGGCGCCGGCGGCTTCATTGCTTCTTGGCTTGTCAAACTCCTTCTTGAAAAGGGTTACACTGTTAGAGGAACTGTCAGAAACCCAGATGATCAGAAAAATTCTCACTTGAAAGAGTTGGAAGGAGCAAAGGAGAGGTTAACTTTATACAGTGCTGATCTTCTTGATTATGAAAGCCTCAGAGCAGCCATTGTTGGTTGCCATGGAGTTTTCCATACTGCATCTCCTGTCACTGATGATCCAGAAAAGGTGGAGCAGGCCATCATTGGAACAAAGAACGTGCTATCAGCGGCGGCTGAGGCAAAGGTCCGCCGTGTCGTCTTCACATCGTCGATCGGCACGGTGTACATGAACCCCAACCGCCGCCCAGACGCGGTGGTTGATGACTCATGCTGGAGTGATCTTGAATTCTGCAAGAACACCAAGAATTGGTATTGCTACGCGAAGACGGTGGCGGAGCAGACGGCATGGGAGGTGGCGGCGGAGAGCGGGGTGGATCTAGTGGTGGTGAACCCCATGTTGGTGCTGGGACCATTGCTGCAACCAACAGTAAATGCAAGTGTGGTTCATATATTGAAGTATTTGACAGGATCAGCAAAGACTTATGTGAATGCCGTTCAAGGGTATGTAGATGTCAAGGATGTGGCCAAAGCCCACCTTCTTGTTTACGAATCTCCGGCGGCCGCCGGCAGATATATTTGTGCAGAGAGCATGCTCCACCGTGAAGAGTTGGTGGAGATTCTTGCAAACTTATTCCCTCAATACCCTCTTCCCACGAAGTGCTCGGATGAGGTGAACCCCAGGAAGAAACCCTACAAATACAGTGTGGAAAAGCTAAAGGAATTGGGAATGGAATTCACACCAATGAAGCAATGTCTTTATGAAACTGTGAAAAGTCTACAAGAGAATGGTCATCTTCCACTTACCACTCAACAAGAATGA | 990 | 48.69 | MPAFDISTTSGETVCVTGAGGFIASWLVKLLLEKGYTVRGTVRNPDDQKNSHLKELEGAKERLTLYSADLLDYESLRAAIVGCHGVFHTASPVTDDPEKVEQAIIGTKNVLSAAAEAKVRRVVFTSSIGTVYMNPNRRPDAVVDDSCWSDLEFCKNTKNWYCYAKTVAEQTAWEVAAESGVDLVVVNPMLVLGPLLQPTVNASVVHILKYLTGSAKTYVNAVQGYVDVKDVAKAHLLVYESPAAAGRYICAESMLHREELVEILANLFPQYPLPTKCSDEVNPRKKPYKYSVEKLKELGMEFTPMKQCLYETVKSLQENGHLPLTTQQE | 329 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 4083619 | 4085919 | + | evm.model.ptg000003l.1503 | HCH6g0289 | 545783 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH6g0289 | 329 | Gene3D | - | 4 | 329 | - | - | |
HCH6g0289 | 329 | CDD | FR_SDR_e | 14 | 299 | - | - | |
HCH6g0289 | 329 | PANTHER | NAD DEPENDENT EPIMERASE/DEHYDRATASE | 13 | 315 | IPR050425 | GO:0016616(PANTHER) | |
HCH6g0289 | 329 | Pfam | NAD dependent epimerase/dehydratase family | 14 | 245 | IPR001509 | - | |
HCH6g0289 | 329 | SUPERFAMILY | NAD(P)-binding Rossmann-fold domains | 7 | 317 | IPR036291 | - | |
HCH6g0289 | 329 | FunFam | Cinnamoyl-CoA reductase 1 | 5 | 329 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH12g0026 | HCH-Chr12:172021 | HCH6g0289 | HCH-Chr6:4083619 | 2.60E-77 | dispersed | |
HCH3g1469 | HCH-Chr3:52735243 | HCH6g0289 | HCH-Chr6:4083619 | 6.00E-69 | dispersed | |
HCH4g1266 | HCH-Chr4:8712495 | HCH6g0289 | HCH-Chr6:4083619 | 4.00E-148 | dispersed | |
HCH6g0287 | HCH-Chr6:4062714 | HCH6g0289 | HCH-Chr6:4083619 | 9.10E-166 | dispersed | |
HCH6g0289 | HCH-Chr6:4083619 | HCH6g0488 | HCH-Chr6:17091363 | 1.30E-79 | dispersed | |
HCH6g0288 | HCH-Chr6:4073912 | HCH6g0289 | HCH-Chr6:4083619 | 1.50E-168 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH6g0289 | K09753 | - | csv:116401652 | 577.785 |