Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g0491 ATGGCGTCATTAGCTAAACAAACTTTGGAAAGCCGACAATGGATTCCTAGTATTATTGGGACGAACAAATGTGAAAGCTACTTGATTTTTAGAAGTGAAACTGCCCTTGGGGAAGCATTTCGGATGTTCTTATATTTTATGGGCATCGCTTATTGTTTCATTGGATTGTCTGCTATTACTGCCCGTTTCTTCCAGTCCATGGAGAATGTTGTGAAGCACTCAAGGAAGGTGGTCAAGATAGATCCTTACACCAATGCTGAAATTATTCGATATGAGAAGGTCTGGAATTTTACAATTGCAGATATCAGCTTGCTGGCATTTGGCACTAGCTTTCCTCAAATATCATTAGCTACTATTGATGCTATTCGAAATATTGGCAATCTGTATGCTGGAGGTTTGGGACCTGGAACTCTTGTTGGTTCTGCTGCGTTCGACCTTTTCCCTATCCATGCTGTTTGCGTTGTAGTGCCAAAGGCAGGAGAGTTGAAAAAGATATCTGATATAGGAGTCTGGCTGGTTGAGCTCTTTTGGTCTTTTTGGGCTTATATTTGGCTATACATTATTTTAGAGGTGTGGACTCCAAATGTGATAACTCTTTGGGAAGGTTCATTGACTGTGTTACAATATGGATTATTGCTGTTTCATGCTTATGTGCAAGATAAGCAATGGCCCTACTTGTCTCTTCCTTTGGTGAGATCTGAGAGGCCAGATGAATGGGTGCCACCCGAGACTAATGTCTATAATGAAATACTTCAAGTCCGTGAGAATGAGAAGAAAAACATTGTTGATCTTTTCTCTGTCCATGCTGGAAATGAGACAGTGTATCATGAAGTTCCCGGAAATGATGATGCTGAATGCTCCAGTGGTAATTTTCTAAAGAAGATAGATGTAGACCACCCTCATGTACTTTCAGTTTGGAAGCAACAATTTGTGGATGCACTCTCGTTGGAATCTAAGGAATCTAAAAAGCTGAAAAACATCCATTTACGACTTGCAAGAATGTGTTGGCCGTCACTTGTTGCTCCCTGGAGACTTTTGTTTGCATTTGTGCCTCCTTGTCACATTGCTCATGGATGGCTTGCCTTCATTTGCTCTCTTATTTTCATCAGTGGGATAGCTTATGTCGTAACAAAGCTGACAGATCTTTTAAGCTGTGTCTCAGGAATAAATCCTTATGTCATAGCATTTACAGCATTGGCAAGTGGAACATCATGGCCAGATTTAGTGGCTAGTAAGATTGCTGCTGAGCGTCAGACGACTGCAGACTCAGCCATTGCAAACATTACTTGCAGCAATTCAGTGAATATATACGTAGGCATTGGATTTCCTTGGCTGATTAGCACCACATACAATTTCATAGCTTATAGAGAACCCCTGCGGATCAAGGATGCAGCAGGTCTCAGTTTCTCTTTGCTAATCTTCTTTGCGACTTCTGTGGGTTGTATTGCGGTTCTTGTATTTAGGCGTCTTACATTAGGTGCAGAACTCGGAGGGCCGAGGCACTGGGCTTGGATTACCTGTTTCTATTTTATGTTGCTTTGGGTTATTTTTGTTGTGTTGTCTTCCCTCAAGGTTTCAGATATCATATGA 1590 41.38 MASLAKQTLESRQWIPSIIGTNKCESYLIFRSETALGEAFRMFLYFMGIAYCFIGLSAITARFFQSMENVVKHSRKVVKIDPYTNAEIIRYEKVWNFTIADISLLAFGTSFPQISLATIDAIRNIGNLYAGGLGPGTLVGSAAFDLFPIHAVCVVVPKAGELKKISDIGVWLVELFWSFWAYIWLYIILEVWTPNVITLWEGSLTVLQYGLLLFHAYVQDKQWPYLSLPLVRSERPDEWVPPETNVYNEILQVRENEKKNIVDLFSVHAGNETVYHEVPGNDDAECSSGNFLKKIDVDHPHVLSVWKQQFVDALSLESKESKKLKNIHLRLARMCWPSLVAPWRLLFAFVPPCHIAHGWLAFICSLIFISGIAYVVTKLTDLLSCVSGINPYVIAFTALASGTSWPDLVASKIAAERQTTADSAIANITCSNSVNIYVGIGFPWLISTTYNFIAYREPLRIKDAAGLSFSLLIFFATSVGCIAVLVFRRLTLGAELGGPRHWAWITCFYFMLLWVIFVVLSSLKVSDII 529
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 17236925 17247361 - evm.model.ptg000003l.1301 HCH6g0491 545985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g0491 529 PANTHER SODIUM/CALCIUM EXCHANGER 19 224 IPR051171 GO:0015491(PANTHER)|GO:0016020(PANTHER)|GO:0030001(PANTHER)
HCH6g0491 529 Pfam Sodium/calcium exchanger protein 357 521 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH6g0491 529 Pfam Sodium/calcium exchanger protein 46 217 IPR004837 GO:0016020(InterPro)|GO:0055085(InterPro)
HCH6g0491 529 Gene3D - 314 523 IPR044880 -
HCH6g0491 529 Gene3D - 98 269 IPR044880 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g0491 K03452 - csv:101205540 879.396