Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g0528 | ATGCACCGTGGATCAAGGTTGCTAGGTTGGTGGTCAATCGATGAAGCCACTCAAGAGGAACAAGCTAAACTCTTTTCTCCCGGAACTTCTGGGTACGATACTTTCTCAGCAGAGACAGTAAAGAAAATGCCCAAAACCAACCTCATTGATGAGATTTGGAGACTACAAGCTGCATTAAATCAGCAGACAGAAGTTACCAAATTGAGCCGGCAAGAGCACGAAAAACTTCTCAATGAAAAGATTCTCTGTAGAGTATGCTTTGATGAACACATTGATATGGTTCTTCTTCCATGTAGGCATCACATTCTCTGCAGGTATTTCGATTTCATCCTTCTCTTTTGA | 342 | 41.81 | MHRGSRLLGWWSIDEATQEEQAKLFSPGTSGYDTFSAETVKKMPKTNLIDEIWRLQAALNQQTEVTKLSRQEHEKLLNEKILCRVCFDEHIDMVLLPCRHHILCRYFDFILLF | 113 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 25650488 | 25652164 | - | evm.model.ptg000003l.1264 | HCH6g0528 | 546022 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g0528 | 113 | PANTHER | TRANSMEMBRANE FRAGILE-X-F-ASSOCIATED PROTEIN | 1 | 105 | - | - | |
| HCH6g0528 | 113 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 57 | 106 | IPR013083 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH3g0939 | HCH-Chr3:8769001 | HCH6g0528 | HCH-Chr6:25650488 | 4.20E-62 | dispersed | |
| HCH6g0528 | HCH-Chr6:25650488 | HCH8g1191 | HCH-Chr8:47378394 | 2.10E-37 | dispersed | |
| HCH6g0528 | HCH-Chr6:25650488 | HCH10g1238 | HCH-Chr10:44068284 | 3.10E-57 | transposed |
Pathway information