Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g0566 ATGCTGAATATGCGACAGCAACAGTCGTTGGTGATGAAGGACGAGTCCGTATCTCGGCTTTTAATCTCATTCACCACTCTATTTCTCCTCCTAGCAACCTCGGAAGCCGCAATACCTTACGGAAATGGTAACTCCGACTTTAACCATCGGAAAGTTTCTCCGATTCGAACTCGCTCTTCTTCTATTTTAAACACCACATACGCCGTCGTCTTCGACGCGGGCAGTTCTGGTACCCGCGTTCATGTCTACCACTTCAACCATAACCTGGATCTCCTTCGGATTGGTAAGGACTTCGAGGTTTTTGTGAAGACAAAACCCGGGTTGAGTGCGTATGGCGACGAGCCGGAGAAGGCGGAGGTGTCTTTGATTCCTTTACTAGACGAGGCGGAAAGAGCGGTACCACCGGAGTTTCATCCAACGACGCCTCTTATTCTTGGGGCAACGGCAGGATTGAGGTTACTGGAAGGAGACAAAGCTGAGAGAATTTTGGAGTCGGTGAGAAAACTTTTCAAAACCAATAGCTCCTTCAAATACGAAGGTGATGCAGTTACAATTCTCCACGGAACCCAAGAGGGTTCCTACTTGTGGGTGACCATAAACTATCTGTTGGGGAATTTAGGAAAGAAATATTCAAAAACAATTGGGGTAGTTGACCTTGGAGGTGGGTCAGTTCAAATGGCTTATGCCATTTCCAAAGATGAAGCAGAAAAGGCACCAAAATTACCAGATAATAAGGACTCATATGTCCAAGATTTTTTTCTCATGGGAACAAAATATAACCTCTACGTTCACAGTTACTTGAACTACGGTTTATTAGCTGCCCGAGCAGAGATATTGAAAGTGACCCAAAACTCTACCAACCCTTGCATTTTAGCTGGCTATCAAGGTACATATGAATACAATGGCATGGAATACAAGGCATCAGCTTCTCCATTTGGATCAAACATGGGTGGTTGTAGGAGGGTCATTTTGGAGGCTATTAAAGCCAATAAACCATGTAATTACAGTGCATGCACTTTTGATGGAATATGGAATGGTGGTGGAGGAGATGGTCAAAAGAATCTCTATTTTGCTTCTTTATTCTATGACAAGGCAGTCCAGACTGATTTCATTGACCCGGACAAACCAAAGGCCAAAGTTCGACCTATAGATTACAAAAAAGTGGCAGAGCGAGCTTGCATAACCAAATTTGTTGATGCCAAGAATGCCTTCCCAAACTTCTACGAAGAAGACTTGGCATTCGTATGCATGGATCTAGTTTATGAGTACACTCTCCTTGTCGATGGATTTGGTTTGGATCCAACAAAAGAGATAACATTAGTGCAAAGACTCAAATATCGAGGTTCCTTGGTTGAGGTTGCATGGCCCTTGGGCAATGCCCTGACTACTATCTCATCACTAGCTTATTCGCATTCGGGTCATTCATCAATTTAA 1434 43.79 MLNMRQQQSLVMKDESVSRLLISFTTLFLLLATSEAAIPYGNGNSDFNHRKVSPIRTRSSSILNTTYAVVFDAGSSGTRVHVYHFNHNLDLLRIGKDFEVFVKTKPGLSAYGDEPEKAEVSLIPLLDEAERAVPPEFHPTTPLILGATAGLRLLEGDKAERILESVRKLFKTNSSFKYEGDAVTILHGTQEGSYLWVTINYLLGNLGKKYSKTIGVVDLGGGSVQMAYAISKDEAEKAPKLPDNKDSYVQDFFLMGTKYNLYVHSYLNYGLLAARAEILKVTQNSTNPCILAGYQGTYEYNGMEYKASASPFGSNMGGCRRVILEAIKANKPCNYSACTFDGIWNGGGGDGQKNLYFASLFYDKAVQTDFIDPDKPKAKVRPIDYKKVAERACITKFVDAKNAFPNFYEEDLAFVCMDLVYEYTLLVDGFGLDPTKEITLVQRLKYRGSLVEVAWPLGNALTTISSLAYSHSGHSSI 477
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 33190395 33197089 + evm.model.ptg000003l.1226 HCH6g0566 546060
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g0566 477 Gene3D Exopolyphosphatase. Domain 2 187 447 - -
HCH6g0566 477 FunFam Apyrase 1 187 445 - -
HCH6g0566 477 Pfam GDA1/CD39 (nucleoside phosphatase) family 64 468 IPR000407 GO:0016787(InterPro)
HCH6g0566 477 CDD NBD_sugar-kinase_HSP70_actin 69 228 - -
HCH6g0566 477 Gene3D - 67 461 - -
HCH6g0566 477 ProSitePatterns GDA1/CD39 family of nucleoside phosphatases signature. 186 201 IPR000407 GO:0016787(InterPro)
HCH6g0566 477 PANTHER ADENOSINE/GUANOSINE DIPHOSPHATASE 23 464 IPR000407 GO:0016787(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH12g1396 HCH-Chr12:36367308 HCH6g0566 HCH-Chr6:33190395 5.70E-158 dispersed
HCH6g0566 HCH-Chr6:33190395 HCH9g0877 HCH-Chr9:6297782 1.60E-147 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g0566 K14641 - cit:102627845 507.294