Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| HCH6g0595 | ATGGGGCTGCATTTATTTTCCACTTTTGCCCTCCAACAAAAAGCTTTTCAAGGGAGTCCGAAGAATTTGCTGCTGAACTTCCCTTTCCCATCCCCAACAACTGCAATGGCTAAAATCAGAACAATCAAATCCTCTTCCTCTTTTAGGTGGGTTGGCTGTCAGTTAGACTTGGGTGATTCTAGCAGCAAGGAGAACCAGCAAAAAATGGTTTACTCCAATAATTCAAATGGGATATATAGCAATAGGAAGTTTACTAGTGTTAATTCACCACTATATGAGTACATTCTCTCCAATGTTCGAGAACCTGAGATCCTACAACAACTTCGCGAGGAGACTAGCTCAATGCATGGTAGTCAAATGCAGGTATCTCCAGATCAAGCACAGCTACTTGCATTGCTTGTTCAGATTCTCGGTGCAAAGCGGTGCATTGAAGTTGGTGTTTACACTGGGTATTCATCCTTGGCTGTAGCACTAGTCCTCCCTGAATCAGGACGTCTAGTTGCCTGTGAAAGAGATGCCAAATCTCTTGAGGTTGCGAAAAGATTTTATGAGCGTGCTGGTGTCTCACACAAAGTGGATGTGAGGCACGGGCTGGCGGCAGATACACTGAAATCACTGATTACAAATGGTGAAGCTTGCAGCTATGATTTTGCCTTTATTGATGCCGAGAAGAGAATGTATGAGGAATATTTTGAACTGTTACTACAACTGGTGAGGGTTGGAGGTGTGATTGTCATTGACAATGTCCTTTGGTATGGAAAAGTCGCAGACCCAACGGTAAATGATGAGAAGACTACTAGCATCAGGAGATTGAATAAACGGATAATTGAAGATGATCGAGTCAGTATCAGTATGGTTCCCATTGGAGATGGCATGACAATTTGCCAAAAGAGATGA | 897 | 42.92 | MGLHLFSTFALQQKAFQGSPKNLLLNFPFPSPTTAMAKIRTIKSSSSFRWVGCQLDLGDSSSKENQQKMVYSNNSNGIYSNRKFTSVNSPLYEYILSNVREPEILQQLREETSSMHGSQMQVSPDQAQLLALLVQILGAKRCIEVGVYTGYSSLAVALVLPESGRLVACERDAKSLEVAKRFYERAGVSHKVDVRHGLAADTLKSLITNGEACSYDFAFIDAEKRMYEEYFELLLQLVRVGGVIVIDNVLWYGKVADPTVNDEKTTSIRRLNKRIIEDDRVSISMVPIGDGMTICQKR | 298 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 6 | 35510266 | 35524063 | - | evm.model.ptg000003l.1197 | HCH6g0595 | 546089 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| HCH6g0595 | 298 | Gene3D | Vaccinia Virus protein VP39 | 72 | 298 | IPR029063 | - | |
| HCH6g0595 | 298 | SUPERFAMILY | S-adenosyl-L-methionine-dependent methyltransferases | 95 | 298 | IPR029063 | - | |
| HCH6g0595 | 298 | CDD | AdoMet_MTases | 141 | 246 | - | - | |
| HCH6g0595 | 298 | Pfam | O-methyltransferase | 99 | 297 | IPR002935 | GO:0008171(InterPro) | |
| HCH6g0595 | 298 | ProSiteProfiles | SAM-dependent O-methyltransferase class I-type profile. | 81 | 298 | IPR002935 | GO:0008171(InterPro) | |
| HCH6g0595 | 298 | PANTHER | O-METHYLTRANSFERASE-RELATED | 85 | 297 | IPR050362 | GO:0008757(PANTHER) |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| HCH6g0595 | HCH-Chr6:35510266 | HCH14g0292 | HCH-Chr14:31421691 | 6.50E-38 | transposed |
Pathway information