Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH6g0654 | ATGGCGGTCGAAGTGAAACTATTGACCACCTGGCCCAGCATGTTTGGAATGAGGGCTCAAGTAGCCTTGGCTGAGAAGGGAGTTAGCTATGAATATGTGGAAGAGGATTTGGTGAATAAGAGTCCTTTGCTTTTGGAGATGAACCCGGTTCACAAGAAGATTCCGGTTCTCATTCACAATGGAAAACCCATCAACGAATCTCTGATTATTGTTGAGTATATTGATGAAGTGTGGAAGGATAAAACGCCTCTGTTGCCGTCCGATCCTTACGAGAGAGCTCAGGCCAGATTCTGGGCTGACTTCATTGACAAAAAGCTTTATGATGCCGGGAGAAAGACATGGGCTACCAAGGGAGAGGAGCAAGAGGCGGGGACGAAGGATTTGATAGAAATTTTGAAGCAATTAGAGGAAGTTTTAGGAGAAAAGGGTTACTTTGGAGGAGAAAATTTGGGATTTTTAGATATTGCTTTGATTGGATTCTCCACCTGGTTTTATTCCTTTGAAACCCATGGAAACTTCAGTGTAGAAGCTGAGTGTCCAAAGATAAGTGCTTGGGTGAAGAGGTGTCTGCAAAAGGAGAGTGTTTCAAAGTCACTCCCTGACCCTAAGAAGGTCTATGAGTTTGTGCTTCAATTGAAGAAGATATTTGGTATTTAA | 657 | 43.07 | MAVEVKLLTTWPSMFGMRAQVALAEKGVSYEYVEEDLVNKSPLLLEMNPVHKKIPVLIHNGKPINESLIIVEYIDEVWKDKTPLLPSDPYERAQARFWADFIDKKLYDAGRKTWATKGEEQEAGTKDLIEILKQLEEVLGEKGYFGGENLGFLDIALIGFSTWFYSFETHGNFSVEAECPKISAWVKRCLQKESVSKSLPDPKKVYEFVLQLKKIFGI | 218 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 39083865 | 39084614 | + | evm.model.ptg000003l.1138 | HCH6g0654 | 546148 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH6g0654 | 218 | CDD | GST_C_Tau | 89 | 212 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) | |
HCH6g0654 | 218 | Gene3D | - | 88 | 218 | - | - | |
HCH6g0654 | 218 | SFLD | Glutathione Transferase (cytosolic) | 4 | 215 | IPR040079 | - | |
HCH6g0654 | 218 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 82 | IPR004045 | - | |
HCH6g0654 | 218 | SUPERFAMILY | GST C-terminal domain-like | 76 | 215 | IPR036282 | - | |
HCH6g0654 | 218 | FunFam | Glutathione S-transferase U20 | 88 | 218 | - | - | |
HCH6g0654 | 218 | Gene3D | Glutaredoxin | 1 | 87 | - | - | |
HCH6g0654 | 218 | SUPERFAMILY | Thioredoxin-like | 5 | 107 | IPR036249 | - | |
HCH6g0654 | 218 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 88 | 216 | IPR010987 | - | |
HCH6g0654 | 218 | SFLD | Main.3: Omega- and Tau-like | 4 | 215 | IPR045073 | - | |
HCH6g0654 | 218 | Pfam | Glutathione S-transferase, C-terminal domain | 116 | 192 | IPR004046 | - | |
HCH6g0654 | 218 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 76 | IPR004045 | - | |
HCH6g0654 | 218 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 209 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
HCH6g0654 | 218 | FunFam | Tau class glutathione S-transferase | 1 | 87 | - | - | |
HCH6g0654 | 218 | CDD | GST_N_Tau | 5 | 78 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH6g0589 | HCH-Chr6:34891142 | HCH6g0654 | HCH-Chr6:39083865 | 4.80E-123 | dispersed | |
HCH6g0651 | HCH-Chr6:38642562 | HCH6g0654 | HCH-Chr6:39083865 | 1.20E-39 | dispersed | |
HCH6g0652 | HCH-Chr6:38976200 | HCH6g0654 | HCH-Chr6:39083865 | 2.00E-97 | dispersed | |
HCH6g0654 | HCH-Chr6:39083865 | HCH7g1512 | HCH-Chr7:47684223 | 7.60E-44 | dispersed | |
HCH6g0654 | HCH-Chr6:39083865 | HCH6g0656 | HCH-Chr6:39268397 | 3.10E-90 | proximal | |
HCH6g0653 | HCH-Chr6:38999837 | HCH6g0654 | HCH-Chr6:39083865 | 5.50E-95 | tandem |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH6g0654 | K00799 | - | csv:101218562 | 350.132 |