Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH6g0656 | ATGACGGAAGAAGTGAAACTGCTGGATTTCTGGGCGAGCATGTTTGGAATAAGAGTTCGAATAGCGTTGGCCGAGAAGGGAGTTAGCTACGAATATGTGGAAGAGGATTTGGAGAAACCCAAGAGCCCTCTGCTTTTAGAGATGAACCCAATTCATAAGAAGATCCCAGTTCTCATCCATAATGGAATACCCATCTGTGAATCTCTTATAATTCTTGAATATATCGATCAAGTCTGGAACGACACGGCTCCTCTTCTACCGTCCGATCCTTACGGCAGGTCACAAGCCAGGTTCTGGGCTGATTTCATCGATAAGAAGCTTAATACTGCTGGAAGAAAGATATGGACCTCAAAGGCCAAGGGAGAGGAGCAAGAGTCGGGGAAGAAGGAACTGATAGAGATTTTGAAGGAAATGGAACAAGTTCTAGGAGAAAAGGCTTATTTTGGAGGTGAAAGTTTTGGGTTTTTAGATATTGCTTTGATTGGATTTTCTTGCTGGTTTCATACATATGAAAACTGTGGAAATTACTTCAGCGCTGAGTCTGAGTTGCCAAAATTAGTTGCTTGGGTGAAGAGGTGCCTGCAAAAGGAGAGTGTTTCAAAGTCCCTCCCTGACCCTCAGAAGGTCTATGACTTTGTGATTCAGCTGAGGAAGGAACATGAAATTGATTAG | 672 | 43.15 | MTEEVKLLDFWASMFGIRVRIALAEKGVSYEYVEEDLEKPKSPLLLEMNPIHKKIPVLIHNGIPICESLIILEYIDQVWNDTAPLLPSDPYGRSQARFWADFIDKKLNTAGRKIWTSKAKGEEQESGKKELIEILKEMEQVLGEKAYFGGESFGFLDIALIGFSCWFHTYENCGNYFSAESELPKLVAWVKRCLQKESVSKSLPDPQKVYDFVIQLRKEHEID | 223 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 39268397 | 39269178 | + | evm.model.ptg000003l.1136 | HCH6g0656 | 546150 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH6g0656 | 223 | Pfam | Glutathione S-transferase, N-terminal domain | 4 | 77 | IPR004045 | - | |
HCH6g0656 | 223 | ProSiteProfiles | Soluble glutathione S-transferase C-terminal domain profile. | 89 | 212 | IPR010987 | - | |
HCH6g0656 | 223 | SUPERFAMILY | Thioredoxin-like | 5 | 107 | IPR036249 | - | |
HCH6g0656 | 223 | Gene3D | - | 89 | 223 | - | - | |
HCH6g0656 | 223 | CDD | GST_N_Tau | 5 | 79 | - | - | |
HCH6g0656 | 223 | FunFam | Glutathione S-transferase U20 | 89 | 223 | - | - | |
HCH6g0656 | 223 | ProSiteProfiles | Soluble glutathione S-transferase N-terminal domain profile. | 3 | 83 | IPR004045 | - | |
HCH6g0656 | 223 | SFLD | Glutathione Transferase (cytosolic) | 2 | 220 | IPR040079 | - | |
HCH6g0656 | 223 | SFLD | Main.3: Omega- and Tau-like | 2 | 220 | IPR045073 | - | |
HCH6g0656 | 223 | FunFam | Tau class glutathione S-transferase | 1 | 88 | - | - | |
HCH6g0656 | 223 | SUPERFAMILY | GST C-terminal domain-like | 78 | 218 | IPR036282 | - | |
HCH6g0656 | 223 | Pfam | Glutathione S-transferase, C-terminal domain | 117 | 196 | IPR004046 | - | |
HCH6g0656 | 223 | Gene3D | Glutaredoxin | 1 | 88 | - | - | |
HCH6g0656 | 223 | PANTHER | GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING | 4 | 213 | IPR045073 | GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER) | |
HCH6g0656 | 223 | CDD | GST_C_Tau | 90 | 213 | IPR045074 | GO:0004364(InterPro)|GO:0006749(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH6g0584 | HCH-Chr6:34711889 | HCH6g0656 | HCH-Chr6:39268397 | 3.40E-124 | dispersed | |
HCH6g0653 | HCH-Chr6:38999837 | HCH6g0656 | HCH-Chr6:39268397 | 2.80E-91 | dispersed | |
HCH6g0656 | HCH-Chr6:39268397 | HCH9g0729 | HCH-Chr9:4853678 | 4.20E-42 | dispersed | |
HCH6g0654 | HCH-Chr6:39083865 | HCH6g0656 | HCH-Chr6:39268397 | 3.10E-90 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
HCH6g0656 | K00799 | - | csv:101218562 | 322.013 |