Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g0656 ATGACGGAAGAAGTGAAACTGCTGGATTTCTGGGCGAGCATGTTTGGAATAAGAGTTCGAATAGCGTTGGCCGAGAAGGGAGTTAGCTACGAATATGTGGAAGAGGATTTGGAGAAACCCAAGAGCCCTCTGCTTTTAGAGATGAACCCAATTCATAAGAAGATCCCAGTTCTCATCCATAATGGAATACCCATCTGTGAATCTCTTATAATTCTTGAATATATCGATCAAGTCTGGAACGACACGGCTCCTCTTCTACCGTCCGATCCTTACGGCAGGTCACAAGCCAGGTTCTGGGCTGATTTCATCGATAAGAAGCTTAATACTGCTGGAAGAAAGATATGGACCTCAAAGGCCAAGGGAGAGGAGCAAGAGTCGGGGAAGAAGGAACTGATAGAGATTTTGAAGGAAATGGAACAAGTTCTAGGAGAAAAGGCTTATTTTGGAGGTGAAAGTTTTGGGTTTTTAGATATTGCTTTGATTGGATTTTCTTGCTGGTTTCATACATATGAAAACTGTGGAAATTACTTCAGCGCTGAGTCTGAGTTGCCAAAATTAGTTGCTTGGGTGAAGAGGTGCCTGCAAAAGGAGAGTGTTTCAAAGTCCCTCCCTGACCCTCAGAAGGTCTATGACTTTGTGATTCAGCTGAGGAAGGAACATGAAATTGATTAG 672 43.15 MTEEVKLLDFWASMFGIRVRIALAEKGVSYEYVEEDLEKPKSPLLLEMNPIHKKIPVLIHNGIPICESLIILEYIDQVWNDTAPLLPSDPYGRSQARFWADFIDKKLNTAGRKIWTSKAKGEEQESGKKELIEILKEMEQVLGEKAYFGGESFGFLDIALIGFSCWFHTYENCGNYFSAESELPKLVAWVKRCLQKESVSKSLPDPQKVYDFVIQLRKEHEID 223
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 39268397 39269178 + evm.model.ptg000003l.1136 HCH6g0656 546150
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g0656 223 Pfam Glutathione S-transferase, N-terminal domain 4 77 IPR004045 -
HCH6g0656 223 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 212 IPR010987 -
HCH6g0656 223 SUPERFAMILY Thioredoxin-like 5 107 IPR036249 -
HCH6g0656 223 Gene3D - 89 223 - -
HCH6g0656 223 CDD GST_N_Tau 5 79 - -
HCH6g0656 223 FunFam Glutathione S-transferase U20 89 223 - -
HCH6g0656 223 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 3 83 IPR004045 -
HCH6g0656 223 SFLD Glutathione Transferase (cytosolic) 2 220 IPR040079 -
HCH6g0656 223 SFLD Main.3: Omega- and Tau-like 2 220 IPR045073 -
HCH6g0656 223 FunFam Tau class glutathione S-transferase 1 88 - -
HCH6g0656 223 SUPERFAMILY GST C-terminal domain-like 78 218 IPR036282 -
HCH6g0656 223 Pfam Glutathione S-transferase, C-terminal domain 117 196 IPR004046 -
HCH6g0656 223 Gene3D Glutaredoxin 1 88 - -
HCH6g0656 223 PANTHER GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING 4 213 IPR045073 GO:0004364(PANTHER)|GO:0005737(PANTHER)|GO:0006749(PANTHER)
HCH6g0656 223 CDD GST_C_Tau 90 213 IPR045074 GO:0004364(InterPro)|GO:0006749(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0584 HCH-Chr6:34711889 HCH6g0656 HCH-Chr6:39268397 3.40E-124 dispersed
HCH6g0653 HCH-Chr6:38999837 HCH6g0656 HCH-Chr6:39268397 2.80E-91 dispersed
HCH6g0656 HCH-Chr6:39268397 HCH9g0729 HCH-Chr9:4853678 4.20E-42 dispersed
HCH6g0654 HCH-Chr6:39083865 HCH6g0656 HCH-Chr6:39268397 3.10E-90 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g0656 K00799 - csv:101218562 322.013