Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g0773 ATGCGAAATTTTCCCAGCATGCAAATCCTACATTCTAAGAATTCCCTTTCCATCACCATTCTCATTTCTCTTTTCATCTTCTCAATTATCAACGTTTCTAACGGGCAAGATTACATCATCGGCGACGGCGGCGACGACGACGGCGCTGACACGAAGCCAGCAGCTCCCCCACCGGAACAAAATGACTGTAACGGCATATTCTTGTCTTACTCATTCATTTCGAGGGAGAAAGAGCTGCCGCGTGTGAAAAACGCGTCAGCTCAAGCGTGGGCGTTTAAATCGGAGGCAACGATATTGAACGCCGGGTCGACGGAGCTAAAGGCATGGAAAATGTTCATTGGGTTTCATCATGAGGAGATTCTGGTGTCGGCGTCTGGAGCAGTTGTGATGGACGGATCTGATTTTCCGGTGGACGTTGGGAACGGGACGACGTTGGCTGGATATCCGATGACAGATTTGAAAACGTCAATTGAAACGGCGGGAGATTATAATCAGATTCAGGCGAGGATTGAGCTAACGGGATCACAGTTCGGGATAAAGCCGCCGGGAGTTCCGATGCCTAAGACTATACATCTTGTCAATGATGGTTTCAAATGCCCTGCGCCTCGTCGTCGCGGGACAAGAACAATGCACGTATGCTGTAAAAAGGATCCAAAATTTAAGGTGAAAGCAAACAAGAAGACCAAGTTCTTCCCTCGCCAAGATGGTGATCTCTCTCTCGTATATGATGTGCTCCAAGCTTATGGAAACAACTATCAAGCTCAAGTTACAATTGACAACAACAACCCGCTCGGCCGTCTCGATCACTGGAACTTAACCTGGGAATGGATGAGAGGAGAGTTCATTCAAAGCATGAGAGGAGCATATACTCATTCAAGAGACTACTCTCAGTGCATTTATGGTCCTGCTGGCCAATACTACCAAGATTTCGACTTCTCTCAGGTCATGAATTGTGATAAGAGGCCGGTCATCGCGGATCTTCCAGCCGAGCGAAAGGATGATGAGAAGGTTGGTAAGTTGCCATATTGTTGCAGAAACGGAAGCTTGTTGCCAACTTTGATGGATGAGAGCAAAGCTAGGTCTATTTTCCAGTTAACTGTCTACAAGCTTCCACCTGACATGAATAGAACTGCTCTCAATCCACCACAGAAATGGAAGATCAACGGTGTATTGAACCCGACTTACAAATGCGGCCCTCCATTACGAGTCGATCCGACTGAGTTTCCGGACGTGAGCGGCCTTCAGGCAACGAGTACGGCCATTGCAAGTTGGCAAGTGGTGTGCAACATTACGCGACCGAAGGTCAAGCAATCCAGATGCTGTGTTTCATTTTCTGCATACTACAATGACACAGTCATTCCTTGCAATACTTGTGCTTGTGGTTGTCAAGAGCAAGACACTGATACTTGCAATCCAAATGCACCTCCAATGCTACTCCCTCCAGAAGCACTTTTGGTGCCTTTTGATAACAGGACAGCAAAGGCAAAAGCTTGGGCTAAAATCAAACACTACCCAATTCCAAAGAAGTTACCTTGTCCAGATAATTGTGGAGTTAGTCTCAATTGGCATATCAACTCTGATTATGCCAATGGATGGACGGCTAGACTCACACTCTTCAACTGGGAAGATCATCCATTTGAGGATTGGTTCACCGCTATTCAAATGAAGAAAGCCGGTCGAGGTTACGAAAACGTTTATTCTTTCAATGGAACAAAGCTTCCAAATCTCAAAAACACCATCTTCCTCCAAGGCTTGCCTGGCTTAGCTTACTTGATGGGTGAGGTGAATGGAACAAATCCTAAAGTCGATCCCAGAGTTCCAGGAAAGCAGCAATCAGTGGTTTCTTTCACAAAGAAGGGTCTGGCCAACATCAATATACAAAAAGGAGATGGTTTCCCAACAAAAGTATATTTTAATGGTGAAGAATGTGCACTTCCAACAGAAATACCCTTAGCGAATGCAGGACATCGATCTCGCCGCAGTTTCGTGCCCCTCGTACCGATCTTAGTCATTACTTTCATGCTTATAACGAATCGCTTCCATTAA 2046 45.89 MRNFPSMQILHSKNSLSITILISLFIFSIINVSNGQDYIIGDGGDDDGADTKPAAPPPEQNDCNGIFLSYSFISREKELPRVKNASAQAWAFKSEATILNAGSTELKAWKMFIGFHHEEILVSASGAVVMDGSDFPVDVGNGTTLAGYPMTDLKTSIETAGDYNQIQARIELTGSQFGIKPPGVPMPKTIHLVNDGFKCPAPRRRGTRTMHVCCKKDPKFKVKANKKTKFFPRQDGDLSLVYDVLQAYGNNYQAQVTIDNNNPLGRLDHWNLTWEWMRGEFIQSMRGAYTHSRDYSQCIYGPAGQYYQDFDFSQVMNCDKRPVIADLPAERKDDEKVGKLPYCCRNGSLLPTLMDESKARSIFQLTVYKLPPDMNRTALNPPQKWKINGVLNPTYKCGPPLRVDPTEFPDVSGLQATSTAIASWQVVCNITRPKVKQSRCCVSFSAYYNDTVIPCNTCACGCQEQDTDTCNPNAPPMLLPPEALLVPFDNRTAKAKAWAKIKHYPIPKKLPCPDNCGVSLNWHINSDYANGWTARLTLFNWEDHPFEDWFTAIQMKKAGRGYENVYSFNGTKLPNLKNTIFLQGLPGLAYLMGEVNGTNPKVDPRVPGKQQSVVSFTKKGLANINIQKGDGFPTKVYFNGEECALPTEIPLANAGHRSRRSFVPLVPILVITFMLITNRFH 681
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 42505597 42508793 + evm.model.ptg000003l.1019 HCH6g0773 546267
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g0773 681 PANTHER COBRA-LIKE PROTEIN 7 17 676 - -
HCH6g0773 681 Pfam COBRA-like protein 252 431 IPR006918 GO:0010215(InterPro)|GO:0016020(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0773 HCH-Chr6:42505597 HCH9g0320 HCH-Chr9:2011021 2.50E-29 dispersed
HCH7g1047 HCH-Chr7:42430939 HCH6g0773 HCH-Chr6:42505597 1.10E-228 transposed
HCH12g1161 HCH-Chr12:9696256 HCH6g0773 HCH-Chr6:42505597 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g0773 - - - 0.0