Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g0861 ATGAAGTTCTTCAAAACTGGATCTCTTGCTCCAACCAGTGAGATATATGGCATGGCTTTAAATCTCAATCCTGTAGTGCAAATATTTCAATATCCAATTCTGAGATTCCAAATCCTTATTTGCAGGTCTGAGCTGAAAAATGCAGTTCTTGAAGGAGGAATTGCTTTCAACAGGGTTCATGGAACACATGCCTTTGAATATCCTGGACTTGACCCAAGATTCAATCAAGTTTTCAACACAGCAATGTTGAATCTCACAACCATGAACATGAACAAGATGGTCGAGCGCTACGAAGGTTTCGCGAATCTGAAGCAACTTGTTGATGTTGGTGGTGGACTAGGAGTCACCCTTAAAATCATAACTTCCAAATACCCTTCAATCAAGGGAATCAACTTTGATTTGCCTCATGTCATTCAGCATGCCCCTCCCTATCCTGGTGTAGAGCATGTGGGAGGAGACATGTTTGAGAGTGTTCCAAAAGGAGACTCTATTTTTATGAAGTGGATACTACATGATTGGAATGATGAGCATTGCCTCAAGTTACTGAAGAACTGCTATAATGCAATCCCAGATGATGGAAAGGTAATCGCCGCAGAGGCTGTTTTTCCGATCGTTCCTGAGACATCCCCTGCCATGAAAGCTGTTTCTCAAGATGATGTGCATATGATGACACAAAATCCAGGAGGAAAGGAGAGGAACCGAGACGAATTCAGAGCCCTCGCAACCAAAGCCGGGTTTAGAGAGGTCGGATTCCAATGTTTTGTATGTAATCTCTGGATTATGGAGTTCTTGAAATGA 798 42.36 MKFFKTGSLAPTSEIYGMALNLNPVVQIFQYPILRFQILICRSELKNAVLEGGIAFNRVHGTHAFEYPGLDPRFNQVFNTAMLNLTTMNMNKMVERYEGFANLKQLVDVGGGLGVTLKIITSKYPSIKGINFDLPHVIQHAPPYPGVEHVGGDMFESVPKGDSIFMKWILHDWNDEHCLKLLKNCYNAIPDDGKVIAAEAVFPIVPETSPAMKAVSQDDVHMMTQNPGGKERNRDEFRALATKAGFREVGFQCFVCNLWIMEFLK 265
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43421666 43422819 - evm.model.ptg000003l.931 HCH6g0861 546355
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g0861 265 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 44 263 IPR029063 -
HCH6g0861 265 FunFam Caffeic acid O-methyltransferase 23 265 - -
HCH6g0861 265 Pfam O-methyltransferase domain 44 247 IPR001077 GO:0008171(InterPro)
HCH6g0861 265 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 1 265 IPR016461 GO:0008168(InterPro)
HCH6g0861 265 Gene3D Vaccinia Virus protein VP39 18 265 IPR029063 -
HCH6g0861 265 PANTHER O-METHYLTRANSFERASE 8 252 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0861 HCH-Chr6:43421666 HCH6g0865 HCH-Chr6:43464656 7.60E-123 dispersed
HCH6g0861 HCH-Chr6:43421666 HCH6g0864 HCH-Chr6:43455002 2.40E-116 proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g0861 K13066 - mdm:103421923 342.813