Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g0865 ATGGCTTCCATGGAAGACTCCAAAACCAACATCACTTCCATTGACGATGACCAAGAAAATGAACACTTCACTTACGCCACGCAATTGGCTACCTTATCTGCGTTACCTATGACTCTTCAAGCAGCTTATGAACTTGGAATCTTTGAGATCTTAGCTAAATCTGGCCCTGTCTCTCCCACTGAGATAGCAACAACGCTAGCTGCAGCAAACCCGGATGCTGCATCGATGCTTGATCGGATCCTGAGGCTTCTAGCTACTCATTCAGTGGTTGCTTGTTCTGTTGTTGATAATGATGGGAATGGAAATCTGCAGAGAGTTTATAGCTTAACGCCTATTTCTAAATACTATGTTGGTAACGAAGATGGTGTCTCTTTAGGTCCTATTATTTCCTTGATTCAAGATAAAGTCTTCTTGAATAGTTGGTCTGAGTTGAAAAATGCAGTTCTTGAAGGAGGAATTCCTTTCAACAGAGTTTATGGAACACATGCCTTTGAATATCCTGGATTGGACCCAAGATTCAACCAAGTTTTCAACACAGCAATGTTAAATCACACAACCATGGCCATGAAAAAGATCGTCGAGTGCTACGAAGGTTTCGCGAATCTGAAGCAACTTGTCGATGTTGGTGGTGGACTAGGAGTCACCCTTAAAATCATAACTTCCAAATACCCTTCAATCAAGGGAATCAACTTTGATTTGCCTCATGTCATTCAGCATGCCCCTCCCTATCCTGGTGTAGAACATGTGGGAGGAGACATGTTTGAGAGTGTTCCAAAGGGAGATGCTATTTTTATGAAGTGGATACTACATGATTGGAGTGATGAGCATTGCCTCAAGTTGCTGAAGAACTGCTATGCTGCAATCCCAGATGATGGAAAGGTAATCGCCGCGGATGCTGTTTTTCCAATCGTTCCTGAGACATCCCCTACCATGAAAGCTGTTTCTCAAGGTGATGTGCTTATGATGACACAAAATCCAGGAGGAAAGGAGAGGAACCGAGACGAATTCAGAGCCCTCGCAACCAAAGCCGGGTTTAGAGAGGTCAGATTCCAATGTTTTGTATGTAATCTCTGGATAATGGAGTTCTTGAAATGA 1095 43.01 MASMEDSKTNITSIDDDQENEHFTYATQLATLSALPMTLQAAYELGIFEILAKSGPVSPTEIATTLAAANPDAASMLDRILRLLATHSVVACSVVDNDGNGNLQRVYSLTPISKYYVGNEDGVSLGPIISLIQDKVFLNSWSELKNAVLEGGIPFNRVYGTHAFEYPGLDPRFNQVFNTAMLNHTTMAMKKIVECYEGFANLKQLVDVGGGLGVTLKIITSKYPSIKGINFDLPHVIQHAPPYPGVEHVGGDMFESVPKGDAIFMKWILHDWSDEHCLKLLKNCYAAIPDDGKVIAADAVFPIVPETSPTMKAVSQGDVLMMTQNPGGKERNRDEFRALATKAGFREVRFQCFVCNLWIMEFLK 364
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 43464656 43466790 - evm.model.ptg000003l.927 HCH6g0865 546359
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g0865 364 Gene3D Vaccinia Virus protein VP39 118 364 IPR029063 -
HCH6g0865 364 PANTHER O-METHYLTRANSFERASE 24 351 IPR016461 GO:0008168(InterPro)|GO:0008171(PANTHER)|GO:0008757(PANTHER)|GO:0019438(PANTHER)|GO:0032259(PANTHER)
HCH6g0865 364 FunFam Caffeic acid 3-O-methyltransferase 3 116 - -
HCH6g0865 364 Pfam Dimerisation domain 37 85 IPR012967 GO:0046983(InterPro)
HCH6g0865 364 ProSiteProfiles SAM-dependent O-methyltransferase class II-type profile. 27 364 IPR016461 GO:0008168(InterPro)
HCH6g0865 364 FunFam Caffeic acid O-methyltransferase 117 364 - -
HCH6g0865 364 Pfam O-methyltransferase domain 141 346 IPR001077 GO:0008171(InterPro)
HCH6g0865 364 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 121 362 IPR029063 -
HCH6g0865 364 PIRSF O-mtase 3 364 IPR016461 GO:0008168(InterPro)
HCH6g0865 364 SUPERFAMILY Winged helix DNA-binding domain 18 121 IPR036390 -
HCH6g0865 364 Gene3D - 2 116 IPR036388 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g0861 HCH-Chr6:43421666 HCH6g0865 HCH-Chr6:43464656 7.60E-123 dispersed
HCH6g0862 HCH-Chr6:43433050 HCH6g0865 HCH-Chr6:43464656 4.70E-49 dispersed
HCH6g0865 HCH-Chr6:43464656 HCH7g0434 HCH-Chr7:3186314 1.10E-44 dispersed
HCH6g0864 HCH-Chr6:43455002 HCH6g0865 HCH-Chr6:43464656 2.40E-183 tandem
HCH6g0865 HCH-Chr6:43464656 HCH6g0866 HCH-Chr6:43488373 2.50E-172 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g0865 K13066 - csv:101214916 514.998