Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
HCH6g0940 | ATGTGGCTTCTTTTGATTGGAGCTATTTCTGTTTTAAGTATTGCACGTTGGCTTTATAACTGGAAAAATCCCAAATGTAATGGAAAACTTCCACCAGGTTCAATGGGATTTCCTTTACTTGGTGAAACCCTGCAGTTCTTTGCTCCCAATACCTCTTCTGATATTCCTCCTTTTATCAGAAAGAGAATGGATAGGTACGGACCGATATTCAGGACTAGTTTGGTTGGAAAACCAGTTATTGTCTCAGCAGACCCTGACTTCAGTTACTTCATCTTTCAACAAGAGGGACAGTTGTTCCAGAGCTGGTATCCAGATACCTTCACAGAGATATTTGGAAGGCAAAATGTTGGTTCCTTGCATGGCTTCATGTATAAATATCTAAAGAACATGGTTCTTCATCTTTTTGGTCCTGAAAGTCTGAAAAAGATGATTCCTGAAGTTGAAGCTGTTGCAACTGCAAGATTGAGACGGTGGTCGTCTCATAACGCACTTGAAATGAAGGACGAGACTGCAAGTATGATATTTGATCTGACTGCTAAGAAGCTGATTAGTTATGATCAAGAACATTCGTCAGAGAATTTGAGAGATAACTTTGTTGCATTCATTCAGGGTTTGATCTCCTTCCCTCTAGATATTCCTGGAACAGCTTATCACAAATGCTTGCAGGGAAGGAAAAGAGCGATGAGGATGCTGAAAAACATGCTACAAGAAAGGCGGGAAAATCCAAGGAAACAACAAACTGATTTTTTTGATTTTGTTCTTGAAGAACTTCAGAAAGATGGAACACTCCTCACTGAGGAAATTGCTTTAGACCTGATGTTTGTGCTACTTTTTGCAAGCTTTGAAACTACTTCACTTGCTCTAACTGCAGCCGTTAAATTTCTCATTGATCACCCTCATGTGCTGAAGGAGTTAACGGCAGAACATGATGCAATTCTGAAGGAAAGGGACAATGCAGATTCTGGACTTACCTGGAAAGAATACAAATCCATGAAATTCACATTTCAGTTCATCAATGAAACTGTGAGACTCGCAAATATTGTTCCAGGAATCTTTCGAAAAGCACTGAAAGAGGTCAATTTTAAGGGATTTACCATTCCAGCAGGGTGGTCCATCATGGTCTGTCCTCCGGCCGTGCACTTGAATCCAGAAAAGTACGTCGACCCCATCGCCTTCAATCCACAGAGATGGGAGAAAACTGAATTGAATGGGGCATCTAAACATTTCATGGCTTTTGGTGGGGGCATGAGATTTTGTGTTGGTACAGATTTTACCAAAGTGCAGATGGCTGTATTTCTCCATTGCCTGGTTACAAAGTACCGGTTCAAAGCAATCAAAGGAGGCAATATCGTCCGAACGCCCGGTTTACAATTTCCTGATGGCTTTCACATCCAGATTGTGGAGAAAGAGTAA | 1413 | 41.05 | MWLLLIGAISVLSIARWLYNWKNPKCNGKLPPGSMGFPLLGETLQFFAPNTSSDIPPFIRKRMDRYGPIFRTSLVGKPVIVSADPDFSYFIFQQEGQLFQSWYPDTFTEIFGRQNVGSLHGFMYKYLKNMVLHLFGPESLKKMIPEVEAVATARLRRWSSHNALEMKDETASMIFDLTAKKLISYDQEHSSENLRDNFVAFIQGLISFPLDIPGTAYHKCLQGRKRAMRMLKNMLQERRENPRKQQTDFFDFVLEELQKDGTLLTEEIALDLMFVLLFASFETTSLALTAAVKFLIDHPHVLKELTAEHDAILKERDNADSGLTWKEYKSMKFTFQFINETVRLANIVPGIFRKALKEVNFKGFTIPAGWSIMVCPPAVHLNPEKYVDPIAFNPQRWEKTELNGASKHFMAFGGGMRFCVGTDFTKVQMAVFLHCLVTKYRFKAIKGGNIVRTPGLQFPDGFHIQIVEKE | 470 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
6 | 44195356 | 44197912 | - | evm.model.ptg000003l.852 | HCH6g0940 | 546434 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 375 | 399 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 419 | 442 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 288 | 314 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 409 | 419 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 335 | 353 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 268 | 285 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | E-class P450 group I signature | 63 | 82 | IPR002401 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | Pfam | Cytochrome P450 | 31 | 452 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | P450 superfamily signature | 410 | 419 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | P450 superfamily signature | 279 | 296 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | P450 superfamily signature | 419 | 430 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PRINTS | P450 superfamily signature | 336 | 347 | IPR001128 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | FunFam | Cytochrome P450 family protein | 22 | 468 | - | - | |
HCH6g0940 | 470 | SUPERFAMILY | Cytochrome P450 | 27 | 464 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | ProSitePatterns | Cytochrome P450 cysteine heme-iron ligand signature. | 412 | 421 | IPR017972 | GO:0005506(InterPro)|GO:0016705(InterPro) | |
HCH6g0940 | 470 | CDD | CYP90-like | 62 | 468 | - | - | |
HCH6g0940 | 470 | Gene3D | Cytochrome P450 | 22 | 468 | IPR036396 | GO:0004497(InterPro)|GO:0005506(InterPro)|GO:0016705(InterPro)|GO:0020037(InterPro) | |
HCH6g0940 | 470 | PANTHER | CYTOCHROME P450 26 | 29 | 440 | - | GO:0004497(PANTHER)|GO:0007275(PANTHER)|GO:0010268(PANTHER)|GO:0016125(PANTHER)|GO:0016132(PANTHER)|GO:0016491(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
HCH1g0208 | HCH-Chr1:30058158 | HCH6g0940 | HCH-Chr6:44195356 | 5.50E-112 | dispersed | |
HCH3g1122 | HCH-Chr3:33024937 | HCH6g0940 | HCH-Chr6:44195356 | 1.50E-86 | dispersed | |
HCH4g0740 | HCH-Chr4:4776752 | HCH6g0940 | HCH-Chr6:44195356 | 2.50E-58 | dispersed | |
HCH6g0114 | HCH-Chr6:1443161 | HCH6g0940 | HCH-Chr6:44195356 | 8.90E-72 | dispersed | |
HCH6g0940 | HCH-Chr6:44195356 | HCH6g1312 | HCH-Chr6:47261063 | 6.60E-61 | dispersed | |
HCH10g0131 | HCH-Chr10:1062900 | HCH6g0940 | HCH-Chr6:44195356 | 1.80E-127 | transposed | |
HCH3g0264 | HCH-Chr3:1689574 | HCH6g0940 | HCH-Chr6:44195356 | 1.50E-116 | transposed | |
HCH3g1121 | HCH-Chr3:33023845 | HCH6g0940 | HCH-Chr6:44195356 | 2.60E-25 | transposed | |
HCH5g0448 | HCH-Chr5:3017407 | HCH6g0940 | HCH-Chr6:44195356 | 1.10E-10 | wgd |
Pathway information
