Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1022 ATGAAGAAGGAAGCAATAGAAGAGTTGGCAATAATAGGTGGTTTGATAGTGGTGCAGTTTGTATATGCAGGAAATTCTGTGTTGATGAGTTATCTAATGTCTCTTGGCATTGATCCTTTGGCTCTTGTCATATTTTCTACCTTTTCCACTTTTCTCATCGTTTCTCCTATTGCTGTTTCTTTTGAAAGATCATATTGGCCGAAGAGATTTAGTCTAAAGTTGATTCTTCAGCTTATTCTCATTTCCTTTGGAGGGGTTACATTGTTTCAGTCCCTTTTCCTAGAAGGTATAAAGCTAACTTCACCATCGGTGGCTACCGCCATGCCGAATCTTACTCCGGGACTGATCTTCGCCATTGCCTGGCTCTTTAGATTAGAGGAAGTGCAGCTAAGTTGCCTCTATAGTAAAATCAAGATATTAGGTACATTTCTATGTGTAATAGGGGCCCTCACAATGAGCATACTGCATAGCACTTCGGCTGCAGCAGAAAAAGATAATTTCCAACTGCTATCTCCTCCATCAGATGGAGTGTTTGATAAAGAGAAGATCATCGGTTGCGCATATCTCCTCTCGGCAGTCTTGATTTTGTCAAGCCTTGTTGTTTTGCAGGCAGCGACGCTCGGCGATTTCCCTGCACCGATGACATTGTGTGCGATAACATCCTTCATTGGGGTGATCTTGACCGTAGGTGTACAGATATTTCAATATCAAAAAGTGGAAATTGGTTGGCCGCTTCTTAGAATCAGAGAATTAGTAGCTTATTCTCTTCTAGGAGGAACGGTGAGCGGAGCTTGCATAAGCTTCAACGGATGGGCGATGAAGAAAAGAGGGCCGGTTTTGGTGTCCATGTTTAGTCCCATTGGAACTGTTTGCTCACTAATTCTCTCAGTTTTCACCTTGGAAGAATCCATCAACATTGGGAGCCTTGCCGGTATGTTTCTCATGTTCACCGGGCTCTACTTTGTGCTGTGGGCGAAAGGAAAAGAAGGTTACAGGAATGAAGACAGCTCTCAGAGTGAGTTTGATGCTCACAAGCCTCTTTTAAGTTGA 1050 43.05 MKKEAIEELAIIGGLIVVQFVYAGNSVLMSYLMSLGIDPLALVIFSTFSTFLIVSPIAVSFERSYWPKRFSLKLILQLILISFGGVTLFQSLFLEGIKLTSPSVATAMPNLTPGLIFAIAWLFRLEEVQLSCLYSKIKILGTFLCVIGALTMSILHSTSAAAEKDNFQLLSPPSDGVFDKEKIIGCAYLLSAVLILSSLVVLQAATLGDFPAPMTLCAITSFIGVILTVGVQIFQYQKVEIGWPLLRIRELVAYSLLGGTVSGACISFNGWAMKKRGPVLVSMFSPIGTVCSLILSVFTLEESINIGSLAGMFLMFTGLYFVLWAKGKEGYRNEDSSQSEFDAHKPLLS 349
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 44971429 44973461 - evm.model.ptg000003l.770 HCH6g1022 546516
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1022 349 Pfam EamA-like transporter family 184 323 IPR000620 GO:0016020(InterPro)
HCH6g1022 349 Pfam EamA-like transporter family 15 153 IPR000620 GO:0016020(InterPro)
HCH6g1022 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 57 153 - -
HCH6g1022 349 PANTHER WAT1-RELATED PROTEIN 16 337 IPR030184 GO:0005886(PANTHER)|GO:0016020(InterPro)|GO:0022857(InterPro)
HCH6g1022 349 SUPERFAMILY Multidrug resistance efflux transporter EmrE 244 327 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH5g0371 HCH-Chr5:2411025 HCH6g1022 HCH-Chr6:44971429 1.20E-120 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1022 - - - 0.0