Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1102 ATGGAAGAATGTAGTAACAATCTTTCTGAGGAAAATACAAATGGGGTTGCTACAAGCACCATGGATCAGAATCAGAAACTAAATGTGTATGTGTGGGACATGGATGAGACTATTATATTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATGTGAAAAAGGGTGAAGAAATTGGAAAAGTTTGGGAGAAGCAAATTCTTGATCTTTGTGATGATCACTTCTTCTATGAACAAATTGAAAACTATAACCAGCCGTCTCTTGATGCCTTGAGAGAATATGATGATGGCCGTGATCTTTCTAATTATGATTTTGAGCAAGACGGTTTTGGTTCACCGTGCGATGATGAAAACAAAAAAAAACTCGCTTACCGGCAACGTGCTATAGCCAATAAGTACAGAGAGGGTTTACAAAATATCTTTGATCAACCGAAGATGAAGCTCTGGAATGATTTGTATGAAGTGACTGATGTCTATACCGATAGATGGTTCTCCTCAGCTCGAGCTTTCTTGGAGGAGTGTTTGTTCGCAGATGCAGATAAACCTCCAGTTGCCTCTGTTGATGGAACTTTTAACACTACTTCTAGAAGTTGTCAGCACGTCAATATCTTGGTGACTTCAGGATCGTTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTCGATGGTCTAATAACACATGGAAATGTCTACAGCTCGTGGGAAGTGGGAAAACTTCAATGTTTCCAGTGGATCAAGGAGCGTTTCAACCATCCAAATGTTCGCTTCTGTGCAATAGGTGATGGATGGGAAGAGTGCGAGGCTGCACAGTCCATGCAATGGCCATTCGTTAAGATTGATCTGCAACCTGGAAGTCCTCACAGGTTTCCTGGTCTGTCTCTTAAAACGCTGGGCTTTTACTTCTCAGTTATTTATGGTAACTCCAATTCAACAAGTGATGAAGAAAAGTTCACATGA 978 41.0 MEECSNNLSEENTNGVATSTMDQNQKLNVYVWDMDETIILLKSLLNGTYAEAFCGSKDVKKGEEIGKVWEKQILDLCDDHFFYEQIENYNQPSLDALREYDDGRDLSNYDFEQDGFGSPCDDENKKKLAYRQRAIANKYREGLQNIFDQPKMKLWNDLYEVTDVYTDRWFSSARAFLEECLFADADKPPVASVDGTFNTTSRSCQHVNILVTSGSLIPSLVKCLLFRLDGLITHGNVYSSWEVGKLQCFQWIKERFNHPNVRFCAIGDGWEECEAAQSMQWPFVKIDLQPGSPHRFPGLSLKTLGFYFSVIYGNSNSTSDEEKFT 325
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 45646145 45648509 + evm.model.ptg000003l.690 HCH6g1102 546596
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1102 325 PANTHER EYES ABSENT 23 310 IPR028472 GO:0004725(PANTHER)|GO:0004725(InterPro)|GO:0005634(PANTHER)|GO:0030154(PANTHER)|GO:0045739(PANTHER)|GO:0048856(PANTHER)
HCH6g1102 325 NCBIfam EYA conserved domain 27 304 IPR006545 GO:0007275(InterPro)
HCH6g1102 325 FunFam Eyes absent homolog 28 296 - -
HCH6g1102 325 SFLD Haloacid Dehalogenase 27 287 - -
HCH6g1102 325 Gene3D - 28 292 IPR038102 -
HCH6g1102 325 SFLD C1.5: HAD, Beta-PGM, Phosphatase Like 27 287 - -
HCH6g1102 325 SUPERFAMILY HAD-like 25 288 IPR036412 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1102 K15616 - csv:101203755 525.783