Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1198 ATGTGTGGTGAAAATTATGTATGGCTATGTGACGAGTATCTAAGCAACATGCATAATATACTTGATAGATGGAAGAATTTCTCAACAAACAAACCGGAAATTTGGCCGGAATCGGAAGCTTTCAGTGACAGAGGACTAGGACCCATACCATCACATTGGAAAGGAATGTGCCAATCCGGAGAACAATTCAACAGCACAGAACATTGTAACAAGAAAATCATAGGTGCACGTTGGTACATAAACGGATTTCTCACTGAATTTGGCGCCATCAACAAATCTTCAGTCAAAGAATACTTCTCCCCAAGAGATTCAAACGGACACGGAACCCAAACCGCCAGCACCGCCGCCGGTTCTTTTGTCACAAACATCAGCTACAAGGGTCTTGGTGCCGGCACTCTAAGAGGCGGCTCGTCCCGCTCACGTTTAGCCATTTACAAAGCGTGTTGGAGTTTACCCAGTGGCGGCGGCGGCCAGTGTGCGTTGGGAAAGAGTGTTCCTTTGTTTGCGGAACTTGATGAAGACAATGTTGTCGCGATTGGGTCGTTTCATGCGAATGCTAGGAATATTTTGGTCGTTTGCTCCGGTGGCAATGATGGGCCGTCGGCGCAGACTGTGATTAATATTTCACCTTGGATTCTGAATGTTGCTGCGAGTTCTATTGATAGAGCTTTTCTTGCATCGATTACTATTGGAAGTAATGCAACTTTCTTGCCTCTGTGA 720 45.83 MCGENYVWLCDEYLSNMHNILDRWKNFSTNKPEIWPESEAFSDRGLGPIPSHWKGMCQSGEQFNSTEHCNKKIIGARWYINGFLTEFGAINKSSVKEYFSPRDSNGHGTQTASTAAGSFVTNISYKGLGAGTLRGGSSRSRLAIYKACWSLPSGGGGQCALGKSVPLFAELDEDNVVAIGSFHANARNILVVCSGGNDGPSAQTVINISPWILNVAASSIDRAFLASITIGSNATFLPL 239
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46399040 46401209 - evm.model.ptg000003l.594 HCH6g1198 546692
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1198 239 SUPERFAMILY Subtilisin-like 34 233 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH6g1198 239 Gene3D Peptidase S8/S53 domain 34 154 IPR036852 GO:0004252(InterPro)|GO:0006508(InterPro)
HCH6g1198 239 PANTHER PROPROTEIN CONVERTASE SUBTILISIN/KEXIN 34 233 IPR045051 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
HCH6g1198 HCH-Chr6:46399040 HCH7g0364 HCH-Chr7:2629960 1.40E-46 dispersed
HCH6g1198 HCH-Chr6:46399040 HCH12g0105 HCH-Chr12:559257 1.50E-48 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1198 - - - 0.0