Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
HCH6g1211 ATGACGCTGAAAGTGTATTCGGATCGTATGTCACAGCCGTCCCGCGCAATTCTAATCTTCTGCAAGGTTAATGGGATTCATTTCGAGGAGGTGAAAATTGACTTATCTAAACGTCAACACTTGACTCCTCAATTCAAAGAGGTTAACCCAATGGCACAGGTTCCTGCCATTGTTGATGGAAGATTTAAGCTCTTTGAGAGTCATGCCATTCTTATCTATCTATCTTCTGCATTTCCCGGTGTGGCGGATCACTGGTATCCAGCTGATCTATCCAGGAGAGCTAAAATTCATGCAGTATTGGATTGGCATCATTCTAATTTACGTCGTGGTGCAGCTCCTTTTGTATTAAATACTGTTCTAGCACCTTTGCTTGGTCGTCAGCTGAATCCGGAAGCAGCCACTGAAGCTGAGAAGCTTTTATCCTCATCACTTTCAAAAATAGAGTCTGTTTGGCTGAAGGGGAATGGCAAGTTCTTGCTTGGTGGCTTTAAACCATCTATAGCTGATCTTAGCTTGGTTTGTGAAATTATGCAATTAGAGCTTTTGGATGAGAAAGATTTTAGTCGTATTCTAGGTCCACATCAGAAAGTGCGGGAGTGGATTGAGAATACTAAAAAAGCTACAAGCCCACATTTTGATGATGTTCACAAACTTCTCTACAAGCTCAAAACAATAATTCAAAATCGAAAGTCAGAAAATACAGCAAGTGGGACAAAGTTGAGCTCGAAATTGACTTCTAAGATGTGA 747 40.96 MTLKVYSDRMSQPSRAILIFCKVNGIHFEEVKIDLSKRQHLTPQFKEVNPMAQVPAIVDGRFKLFESHAILIYLSSAFPGVADHWYPADLSRRAKIHAVLDWHHSNLRRGAAPFVLNTVLAPLLGRQLNPEAATEAEKLLSSSLSKIESVWLKGNGKFLLGGFKPSIADLSLVCEIMQLELLDEKDFSRILGPHQKVREWIENTKKATSPHFDDVHKLLYKLKTIIQNRKSENTASGTKLSSKLTSKM 248
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
6 46554552 46557609 + evm.model.ptg000003l.581 HCH6g1211 546705
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
HCH6g1211 248 SFLD Main.4: Theta-like 1 230 - -
HCH6g1211 248 CDD GST_N_Theta 3 78 IPR040075 -
HCH6g1211 248 Pfam Glutathione S-transferase, N-terminal domain 1 75 IPR004045 -
HCH6g1211 248 Gene3D - 83 245 - -
HCH6g1211 248 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 1 82 IPR004045 -
HCH6g1211 248 PANTHER GLUTATHIONE S-TRANSFERASE T1-RELATED 1 244 IPR043377 -
HCH6g1211 248 SFLD Main (cytGST) 1 230 - -
HCH6g1211 248 CDD GST_C_Theta 92 222 IPR040077 -
HCH6g1211 248 SUPERFAMILY GST C-terminal domain-like 83 207 IPR036282 -
HCH6g1211 248 SUPERFAMILY Thioredoxin-like 1 87 IPR036249 -
HCH6g1211 248 ProSiteProfiles Soluble glutathione S-transferase C-terminal domain profile. 89 226 IPR010987 -
HCH6g1211 248 FunFam Glutathione S-transferase theta-1 83 231 - -
HCH6g1211 248 Gene3D Glutaredoxin 1 82 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
HCH6g1211 K00799 - csv:101211608 362.844